Gene Mchl_1876 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_1876 
Symbol 
ID7113604 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp1931845 
End bp1934079 
Gene Length2235 bp 
Protein Length744 aa 
Translation table11 
GC content68% 
IMG OID643524640 
ProductTonB-dependent siderophore receptor 
Protein accessionYP_002420667 
Protein GI218529851 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid 
TIGRFAM ID[TIGR01783] TonB-dependent siderophore receptor 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.150042 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0292257 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGTCGG TTCGCACTCT CGTCGGCGTC CGCGCCCTGC GGACGATGGC GCTCACAGGC 
GCCTCGTTGA TGGCCCTGAC CCTTGCAGCC GCCGCGCAAC AGGCGACGGC ACGGCTGGAG
GAACTGTCGG TCGAAGGCAG CGGCCGGGGC GCCGGCGCCA CCGGAGGGCC GCCGGCCCAG
CGCGGCGCCG ACGGACGCGC GGCGCCCGAG GATCCGCGCG GCCCCGTCGC CGGCTACGTC
GCCACCCGCT CGGTCACCGC GACCAAGACC AACACGCCCC TGATCGAGAC GCCCCAGGCG
ATCACCGTGA TCGGCCGCGA GCAGATCGAG GCGCAGGGCG CGCAGACGCT GACCCAGGCG
ACGCAGTACA CCGCCGGCAT CTATTCCGGC GTCTACGGCG CCGACGAGCG CGTCGATTTC
TTCACCCTGC GCGGCTTCGT GGCGAGCGAT TACGGGATCT ACAAGGACGG CCTGCAACTG
CTGAACTACG GCTTCGGCAC GCTGAAGACC GAGACCTTCG GGTTGGAGCG CATCGAGGTG
CTGCGCGGCC CGGCCGCGGT GCTGTTCGGC GCCGGCAACC CCGGCGGCCT CGTCAACCAG
GTCACCAAGC GCCCGACGCT CGCCCCCTTC GGCTATGTCG AGATCGCGGG CGGCTCGTTC
GGACAGGTCT ACGGCGCCTT CGACGTCGGC GGCCCGGCCG ACGATTCGGG CCACCTGTTC
TACCGCCTCA CCGGTATCGG ACGTCAGGGC GGCACCCAGG TCGAGGGCGC GGATTCCGAC
CGCGCCTATA TCGCCCCGGC CTTCACGTGG CGGCCGGATG CCGGCACCAC CTTCACGGTG
CTGACGAGCT ATCAGCGCGA TTCCACGGCC GTGACCGCGA ACTTCCTGCC CTATGCCGGC
ACCGTGCGCC CGAACGCGAG CGGCCTGCGC ATCGACCGCT CCCTCAATGT GGGTGATCCC
CGCATCAACA GCTTCCAGCG CGAGCAGGTC TTCGCCGGCT ACGAGTTCGA GCACGCGGTC
GATGACGTGT GGACCGTGCG CCAGAACTTC CGCTACTCGT TCTCGGACGC GACGCAGAAT
TCGTATATCG GCCAGCTCGG CTACGCCGAC CTGCCGCAGA CGCAGCTCTC CCGCTACCAG
TTCCAGTACA GCGACAAGGT CAGCCTGTTC CAGGTCGACA ACCAGGCCGA GGCCCGGTTC
TCCGACGGCC TCGTCGCCCA CGACGTACTG TTCGGCATCG ATTACAAGAA CTACTCGCTC
TACGACAATC AGGCCTCGCT CTTCCCCGCG CCGAACCTGA GCATCATCAA CCCGCTCTAC
GGGCAGATCG TCGGCCGGCC CCTGCCCTAT CAGGTCGACG TCAACAGCTT CCGGCAGCTC
GGCTTCTACG CCCAGGACCA GATCAAGCTC ACCGACCGGC TGAGCCTGAT CGGCGGCCTG
CGCTACGACA TCGCCAACAG CGACGTGCTC AAGAAGCTCG CGCCGGACAC GAGCACGTCC
CGTACCGATA CGGCGCTCAC CGGCCGCATT GCGCTGCTCT ACAATTTCGA TCCCGGCATC
GCGCCCTACG TCGCCTACTC GACCTCGTTC CAGCCGCAGA TCGGCGTCGA TGCCATCACC
GGAGGATCGC TCTCGCCGGA TCGCGGCGAG CAGATCGAGG TCGGCCTGAA GATCGAGCCG
GTCGGCGAGC GCTTCTCCCT CAACATCGCC GCCTTCGACC TCGTGCGCGA CAACCCGCCC
TTCCCCGTCA TCGTCGGCTT CGGCAGCACC CAACTCGGCA CCGTGCGCTC GCGCGGCATC
GAGGGGCAGT TCGTCGCCAG CCTCGCGGAA GGGCTGAACG TCGTCGCGGC GGTGACCCAC
TACGATCTCG AATACACCCG GGTCCGGGAC GCCGCGCTCG GCGACCTCGT CGGCAAGACC
CCGACCAACG TGCCGGAAAC CTTCGCCTCG GTCTTTGCCG ACTACACGAT CCCCCTGGGC
GACTGGCGCG GCTTCGGCTT CGGAGGCGGC GTGCGCTATG TCGGGCGTTC CTACGCCGAC
CAGCTCAACA ATCTGAAAGT GCCGGACTAC GTCCTGTTCG ACGCGACCGT GCACTACAAC
TGGGAGCGCT GGCGCATGGC GATCACCGCC GCCAATCTCG GCGACCGCCG CTTCGTCACC
TCGTGCCAGT CGGCCAATTC CTGCTTCTAC GGCGAGGCCC GCCGCGTGCT GGCGAGCGTG
AGCTATCGCT GGTGA
 
Protein sequence
MGSVRTLVGV RALRTMALTG ASLMALTLAA AAQQATARLE ELSVEGSGRG AGATGGPPAQ 
RGADGRAAPE DPRGPVAGYV ATRSVTATKT NTPLIETPQA ITVIGREQIE AQGAQTLTQA
TQYTAGIYSG VYGADERVDF FTLRGFVASD YGIYKDGLQL LNYGFGTLKT ETFGLERIEV
LRGPAAVLFG AGNPGGLVNQ VTKRPTLAPF GYVEIAGGSF GQVYGAFDVG GPADDSGHLF
YRLTGIGRQG GTQVEGADSD RAYIAPAFTW RPDAGTTFTV LTSYQRDSTA VTANFLPYAG
TVRPNASGLR IDRSLNVGDP RINSFQREQV FAGYEFEHAV DDVWTVRQNF RYSFSDATQN
SYIGQLGYAD LPQTQLSRYQ FQYSDKVSLF QVDNQAEARF SDGLVAHDVL FGIDYKNYSL
YDNQASLFPA PNLSIINPLY GQIVGRPLPY QVDVNSFRQL GFYAQDQIKL TDRLSLIGGL
RYDIANSDVL KKLAPDTSTS RTDTALTGRI ALLYNFDPGI APYVAYSTSF QPQIGVDAIT
GGSLSPDRGE QIEVGLKIEP VGERFSLNIA AFDLVRDNPP FPVIVGFGST QLGTVRSRGI
EGQFVASLAE GLNVVAAVTH YDLEYTRVRD AALGDLVGKT PTNVPETFAS VFADYTIPLG
DWRGFGFGGG VRYVGRSYAD QLNNLKVPDY VLFDATVHYN WERWRMAITA ANLGDRRFVT
SCQSANSCFY GEARRVLASV SYRW