Gene Mchl_1853 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_1853 
Symbol 
ID7113581 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp1909074 
End bp1909916 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content70% 
IMG OID643524617 
Product2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 
Protein accessionYP_002420644 
Protein GI218529828 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2171] Tetrahydrodipicolinate N-succinyltransferase 
TIGRFAM ID[TIGR00965] 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.804136 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.65288 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACACG CCGATCTCGA AAAGACCATC GAAGCCGCCT GGGAGGAGCG CGCCGGCATC 
TCGACCGCGA CCACCGGCGC CGTGCGTGAG GCGGTGGACG AGGCGCTGAA CCTGCTCGAT
TCCGGTCAGG CCCGGGTCGC CGAGAAGGCG GGCGATTCCT GGCAGGTCAA CCAGTGGCTC
AAGAAGGCGG TGCTGCTCTC CTTCCGCCTC AACGACATGG TGCCGATCGA GGGCGGACCC
GGCTCCTCCG CGTGGTGGGA CAAGGTGCCC TCGAAGTTCG CCAACTGGGG CGAGGCCGAG
TTCCGCGCCG CCGGCTTCCG CGCCGTGCCG GGCTGCTTCG TGCGCCGCGG CTCCTACATC
GCGCCGGGCG CGGTGCTGAT GCCGAGCTTC ATCAACCTCG GCGCCCATGT CGGCGAGGGC
ACCATGGTCG ATACCTGGGT GACGATCGGC TCCTGCGCGC AGGTCGGCAA GAACTGTCAC
ATCTCGGGTG GGGCCGGCAT CGCCGGCGTG CTGGAGCCGC TCCAGGCCAA CCCGGTCATC
ATCGAGGACA ACTGCTTCGT CGGTGCCCGC GCCGAGGTCG CCGAGGGCGT GATCATCGGC
GAGGGCTCGG TCCTGTCGAT GGGCGTCTAT ATCGGCGCCT CGACCCGGAT CATCGACCGC
ACCACGGGCG AGACCTTCTA CGGCCGCGTG CCGCCCTACT CCGTGGTCGT GTCGGGCACG
ACGCCCGGCA AGCCGCTGCC CGACGGCACC CCGGGCCCCG GCCTCTACTG CGCCGTGATC
GTCAAGCGCG TCGATGCCGG CACCCGCGCC AAGACCGGCA TCAACGAGCT GCTGCGGACC
TGA
 
Protein sequence
MSHADLEKTI EAAWEERAGI STATTGAVRE AVDEALNLLD SGQARVAEKA GDSWQVNQWL 
KKAVLLSFRL NDMVPIEGGP GSSAWWDKVP SKFANWGEAE FRAAGFRAVP GCFVRRGSYI
APGAVLMPSF INLGAHVGEG TMVDTWVTIG SCAQVGKNCH ISGGAGIAGV LEPLQANPVI
IEDNCFVGAR AEVAEGVIIG EGSVLSMGVY IGASTRIIDR TTGETFYGRV PPYSVVVSGT
TPGKPLPDGT PGPGLYCAVI VKRVDAGTRA KTGINELLRT