Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mchl_1842 |
Symbol | rho |
ID | 7113570 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium chloromethanicum CM4 |
Kingdom | Bacteria |
Replicon accession | NC_011757 |
Strand | + |
Start bp | 1896952 |
End bp | 1898295 |
Gene Length | 1344 bp |
Protein Length | 447 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643524606 |
Product | transcription termination factor Rho |
Protein accession | YP_002420633 |
Protein GI | 218529817 |
COG category | [K] Transcription |
COG ID | [COG1158] Transcription termination factor |
TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.205012 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.660399 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGTCAC AGAACGACGC TCTCACCCCC GTTGAAGCTC CGGCCGAAGC CGTCGTCGCG CCGGCCGATC TCGTCGCCCG GCGTGAGGTG AAGCTTCAGG ACCTCAAGTC CAAAACGCCG ACCGAGCTCA CGGCCTTCGC GGAGGAGGTC GGTGTCGAGA ACGCCTCGAC CATGCGCAAG CAAGAGCTGA TGTTCGCGAT CCTCAAGCAG CTCGCGGCCA ACGAGACCGA GATCATCGGC GCCGGCACGG TCGAGGTGCT CCAGGACGGG TTCGGCTTCC TGCGCTCGCA CGATTCGAAC TATCTGCCGG GTCCGGACGA CATCTACATC TCGCCGACCC AGATCCGCCG CTTCGGCCTG CGCACCGGCG ACACCGTCGA GGGCCCGATC CGCGGCCCCA AGGACGGCGA GCGCTATTTC GCGCTGCTCA AGGTCAACAC GATCAACTTC GAGAACCCGG AGAAGATCAA GCACAAGGTC CACTTCGACA ACCTGACGCC GCTGTTCCCG ACGCAGCGCT TCAAGCTCGA ACTCGACAAC CCGCCGAAAA AAGATTTCAG CCCCCGGATC ATCGACATCG TCTCGCCGAT CGGCAAGGGC CAGCGCGCGC TGATCGTCGC GCCGCCGCGC ACCGGCAAGA CCGTGCTGAT GCAGAACATC GCGCAGTCGA TCACGATCAA CCATCCGGAA TGCTACCTCA TCGTGCTGCT CATCGACGAG CGCCCGGAAG AGGTGACCGA CATGATCCGC TCGGTGAAGG GCGAGGTCAT CGCCTCGACC TTCGACGAGC CGGCCACCCG CCACGTGCAG GTCGCCGAGA TGGTGATCGA GAAGGCCAAG CGCCTGGTCG AGCACGGCCG CGACGTCGTG ATCCTCCTCG ACTCCATCAC CCGCCTCGGC CGCGCCTACA ACACGGTCGT GCCGTCCTCC GGCAAGGTGC TGACCGGCGG TGTCGATGCC AACGCCCTGC AGCGGCCCAA GCGCTTCTTC GGCGCGGCCC GCAACATCGA GGAGGGCGGC TCGCTCTCCA TCATCGCGAC CGCGCTGATC GACACCGGCT CGCGCATGGA CGAGGTGATC TTCGAGGAGT TCAAGGGCAC CGGCAACTCC GAGATCATTC TCGACCGCAA GGTCTCCGAC AAGCGCATCT TCCCGGCCAT CGACATCACC CGCTCCGGCA CCCGTAAGGA AGAGCTGCTG GTGCCGCCGG ACGCGCTCAA GAAGACCTAC GTCCTGCGCC GCATCCTCAA CCCGATGGGC GTCACCGACG CGATCGAGTT CCTCATGGAC AAGCTGCGCC AGACGAAGAG CAACGGCGAC TTCTTCGACT CGATGAACAC CTAA
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Protein sequence | MTSQNDALTP VEAPAEAVVA PADLVARREV KLQDLKSKTP TELTAFAEEV GVENASTMRK QELMFAILKQ LAANETEIIG AGTVEVLQDG FGFLRSHDSN YLPGPDDIYI SPTQIRRFGL RTGDTVEGPI RGPKDGERYF ALLKVNTINF ENPEKIKHKV HFDNLTPLFP TQRFKLELDN PPKKDFSPRI IDIVSPIGKG QRALIVAPPR TGKTVLMQNI AQSITINHPE CYLIVLLIDE RPEEVTDMIR SVKGEVIAST FDEPATRHVQ VAEMVIEKAK RLVEHGRDVV ILLDSITRLG RAYNTVVPSS GKVLTGGVDA NALQRPKRFF GAARNIEEGG SLSIIATALI DTGSRMDEVI FEEFKGTGNS EIILDRKVSD KRIFPAIDIT RSGTRKEELL VPPDALKKTY VLRRILNPMG VTDAIEFLMD KLRQTKSNGD FFDSMNT
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