| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_1675 |
|---|
| Symbol | |
|---|
| ID | 7116820 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium chloromethanicum CM4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011757 |
|---|
| Strand | - |
|---|
| Start bp | 1726512 |
|---|
| End bp | 1728728 |
|---|
| Gene Length | 2217 bp |
|---|
| Protein Length | 738 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 643524439 |
|---|
| Product | Vault protein inter-alpha-trypsin domain protein |
|---|
| Protein accession | YP_002420466 |
|---|
| Protein GI | 218529650 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2425] Uncharacterized protein containing a von Willebrand factor type A (vWA) domain |
|---|
| TIGRFAM ID | [TIGR01167] LPXTG-motif cell wall anchor domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.461102 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCTCGC TTCCCCACTC CCCGCTTCCT TTGTCCCCGC ATTCCCGATC ATCGCTCGCG
CACCCGGCTC CGGGCCTGAC GCGCAACCTT CTGCTCGGGC CGCTGATCGC CCTCCTGCTC
GCCCTCATTG CCGGCATCAC GCCAGCAAGA GCGCAGGATT CGAGAGCGCA GAATTCGAGG
GCGCAGGACG GCAGCGGCAC GCTGCTGCTG CGCTTCGAGG GCGGCGCGCC CGTCGAGGCG
CCCCGCCTCA AGGCGGACGC CGCGATCAGC GTGAGCGGCC TGACCGCGCG GGCGACGATC
ACCCAGGCCT TCCGCAACAC GACGAGCGAG TGGGCCGAGG GCACCTACCT GTTCCCGCTG
CCGGAGGATG CGGCGGTCGA TACGATGAAG CTCGTGGTCG GCGACCGGGT CATCGTCGCC
GACATCCGCG AGCGCGCGGC GGCGCGGCGC GTCTACGAGG CGGCAAAGGC CGAGGGCAAG
GCCGCCGCGC TCACCGAGCA GCAGCGGCCC AACCTGTTCA CCAACGCGGT CGCCAATATC
GGCCCTGGCG AGACCGTCCT GGTGCAGATC GAATACCAGC AGCCGGTGCG GTCCTCCGCC
GGCACCTATG CCTTGCGCCT GCCGACCGTC GCCGCCCCGC GCTACAGCCC CGCTCCCCCG
GCGGTGACGG CCGTCGTCGA GCGGGGCGCT GCCGCCGATC CCGTCCCGGA TCGCGAGAAG
ATCGCGGCCC CGGTGCTCGA CCCGGCCCGC CATGCGCCGA TCAACCCGCT GACGCTCACC
ATCGATCTCA TGGCCGGCTT TCCCCTGGGC CAGGTGCGTA GCGCCACCCA TGCGGTCCGT
ATCGAGGAAC GGTCCGCGAG CGAGCGCCGC ATCACGCTTG CCGACGGCGC CACCGCCGCC
GACCGCGATT TCGAGCTGAC CTGGACCGCC GCCCCCGGCG AGGCACCCTC GATCGGCCTG
TTCCGCGAGC AGGTGGCGGG GGCCGAGGCG GTGCTCGCCG TGGTGACCCC GCCGGAATCC
GCCAGCCCGG CCTCGCCCGT GCCCCGCGAC GTAGTGTTCG TCATCGACAA TTCCGGCTCC
ATGGGCGGCG CCTCGATGCG GCAGGCCAAG GCGAGCCTGC TCATCGGCCT CGACCGGCTG
GGCGCGGGCG ACCGCTTCAA CGTGATCCGC TTCGATCACA GCTTCGACAC GCTGTTTCCC
GATTTGGTGC CCGCAGACGC GGGCCATCTG ATGCGGGCCA AAAGCTTCGT GGCGGGGCTT
CAAGCGAGCG GCGGCACGGA GATGCTGGCG CCGCTACAGG CTGCCCTGCG GGACGCGACG
CCGGAGGAGA CGGGGCGTCT GCGTCAGGTC GTGTTCCTCA CCGACGGCGC CATCGGCAAC
GAGGCGCAGA TCTTCTCGGC CATCGCGACG GAGCGCGGGC GCTCGCGGCT GTTCATGGTT
GGCATCGGCT CGGCCCCGAA CGGCTACCTG ATGCGCCACG CCGCCGAAGT TGGGCAGGGC
AGCTTCACCC AGATCGACAC GCCCGATCAG GTGACCGAGC GGATGCGCGC CCTGTTGGTG
AAGCTGGAAA GCCCCGCCGT CACCGACCTG ACCGCGACCT TCTCCGAGCC CGGCATCGAT
GTGACACCCG CCCGCCTGCC CGACCTCTAC CGCGGCGAGC CGCTCACCCT CTCGGCCCGG
ATGGGGCAGG CCCGCGGCAC CCTGACCCTC ACCGGCCGGA TCGGCGGACA ACCCTGGCAG
ACGCAGCTGC ACCTCGATGC GGCGCAGGAC GGGACCGGCA TCGGCAAGCT CTGGGCGCGG
GCGAAGATCG CCGAGGCCGA GACCGCTCGG CTGACCGGCG GGCTCACGAC GGAGGCGGCC
GACGCGGCGA TCCTGCGGCT GGCGCTCGAC CACGGGCTGA CGACCCGCCT GACCTCGCTG
GTGGCGGTGG ACGCCACCCC GCGCCGGCCA GCCGGGATGC GCCTCGCCAG CACCGAGTTG
CCGCTCAACC TGCCGGCCGG CTGGGACTTC GAGACGGTGT TCGGCACGCA GGATGAGGCG
CCGCAGCTTC CCCCGCCGCC GCGCCAGCGC CGCGCCGCGG CCCCGGCTAC GCAGATCGCG
GCCGCGCAAG CCGTGGCGCT GCCGCAGACC GCGACGGATT TCGAGATCCG CGCATGGCTC
GGAGCGCTGC TGCTGGCGCT CGGTCTCGTC CTCTCCCGCC GCCGGCTCGC AGCGTGA
|
|---|
| Protein sequence | MLSLPHSPLP LSPHSRSSLA HPAPGLTRNL LLGPLIALLL ALIAGITPAR AQDSRAQNSR
AQDGSGTLLL RFEGGAPVEA PRLKADAAIS VSGLTARATI TQAFRNTTSE WAEGTYLFPL
PEDAAVDTMK LVVGDRVIVA DIRERAAARR VYEAAKAEGK AAALTEQQRP NLFTNAVANI
GPGETVLVQI EYQQPVRSSA GTYALRLPTV AAPRYSPAPP AVTAVVERGA AADPVPDREK
IAAPVLDPAR HAPINPLTLT IDLMAGFPLG QVRSATHAVR IEERSASERR ITLADGATAA
DRDFELTWTA APGEAPSIGL FREQVAGAEA VLAVVTPPES ASPASPVPRD VVFVIDNSGS
MGGASMRQAK ASLLIGLDRL GAGDRFNVIR FDHSFDTLFP DLVPADAGHL MRAKSFVAGL
QASGGTEMLA PLQAALRDAT PEETGRLRQV VFLTDGAIGN EAQIFSAIAT ERGRSRLFMV
GIGSAPNGYL MRHAAEVGQG SFTQIDTPDQ VTERMRALLV KLESPAVTDL TATFSEPGID
VTPARLPDLY RGEPLTLSAR MGQARGTLTL TGRIGGQPWQ TQLHLDAAQD GTGIGKLWAR
AKIAEAETAR LTGGLTTEAA DAAILRLALD HGLTTRLTSL VAVDATPRRP AGMRLASTEL
PLNLPAGWDF ETVFGTQDEA PQLPPPPRQR RAAAPATQIA AAQAVALPQT ATDFEIRAWL
GALLLALGLV LSRRRLAA
|
|---|
| |