Gene Mchl_1448 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_1448 
Symbol 
ID7116666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp1502337 
End bp1503350 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content70% 
IMG OID643524218 
Productinner-membrane translocator 
Protein accessionYP_002420253 
Protein GI218529437 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4177] ABC-type branched-chain amino acid transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00412694 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGACCC TCGACCAGAC TGTCGTCGAG GCACCGCCGA CGGTGCCGCG ACGCTCGCCG 
ATCGCTCTCG GCGGCGTCTC GCGCTGGCGC GCGCCGCTGT CGATCCTCGC GCTGCTGGCG
CTGCCCTTCC TGCTTCCCTC GCAGGCGCTC GCAGTCAACG TGCTGATCTA CGGGCTCTAC
GCCGTCGGCT ACAACCTGCT CTACGGTTAT ACCGGCCTGC TCTCCTTCGG CCACGCCGCC
TTCTTCGGCA CGGGGGCCTA TCTCACCGGG ATCGGCATCG GCGCGTTCGG CCTGCACCCG
CTGCTGGCGA TGGCGCTGGC GGTCGTTGCC GCGAGCGGGT TGGCACTCGT CATCGGCACC
GTGTCGATCC GCTCGCGCGG CATCTACTTC GCCATGGTGA CGCTGGCGCT CGCCCAACTC
GTCTACTACG TCGCGCTCCA GGCCTCCTCC TGGACCGGGG GCGAGAACGG GCTTCGCGGC
TTCACGGTCT CGGCCATCGA CCTCGGGATC GTCTCCCTCG ATATCCTGAA CCCGCTGACC
AAGTACCTCT TCGTGCTGGC CTTCGTCGGC GCGGCGCTCG CGCTGATCTC GCGCATCCTC
GCCTCGCCCT TCGGCGCGGT GATCGAGGCG ATCCGCGAGA ACGAGACCCG GGCCCGCGCC
TGCGGCTTCG ACGTGGAGCG CACCAAGCTC CTCGCCTTCG TGCTGTCGGG CCTGTTCTGC
GGCCTCGCCG GAGCGCTCTC GGCGATCCAC CTCTCGATCG TGCCGCTGGA CAGCCTCGCC
TACCACACCT CCGGCACGGC GGTCGTGATG ACGCTGGTGG GCGGCGCGGG CACTTTCTTC
GGCCCCTTCG TCGGCGCCCT GACCGTGCTG GTGCTGGAGG ACGTCCTGAG CCTCTGGACG
CCGCACTGGC AGCTCGCGCT CGGCTCCGTC TTCATCCTGT TCGTGCTGTT CCTGCCCCGC
GGCCTCTGGG GCACGGCGCT GGGGCGGCTC ACCGCCTTGC GGGGGCGCCG ATGA
 
Protein sequence
MQTLDQTVVE APPTVPRRSP IALGGVSRWR APLSILALLA LPFLLPSQAL AVNVLIYGLY 
AVGYNLLYGY TGLLSFGHAA FFGTGAYLTG IGIGAFGLHP LLAMALAVVA ASGLALVIGT
VSIRSRGIYF AMVTLALAQL VYYVALQASS WTGGENGLRG FTVSAIDLGI VSLDILNPLT
KYLFVLAFVG AALALISRIL ASPFGAVIEA IRENETRARA CGFDVERTKL LAFVLSGLFC
GLAGALSAIH LSIVPLDSLA YHTSGTAVVM TLVGGAGTFF GPFVGALTVL VLEDVLSLWT
PHWQLALGSV FILFVLFLPR GLWGTALGRL TALRGRR