Gene Mchl_1426 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_1426 
Symbol 
ID7116644 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp1477482 
End bp1479308 
Gene Length1827 bp 
Protein Length608 aa 
Translation table11 
GC content65% 
IMG OID643524199 
ProductGTP-binding protein TypA 
Protein accessionYP_002420234 
Protein GI218529418 
COG category[T] Signal transduction mechanisms 
COG ID[COG1217] Predicted membrane GTPase involved in stress response 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR01394] GTP-binding protein TypA/BipA 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0201967 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTGC GCAACATCGC CATCATCGCC CACGTCGACC ATGGCAAGAC GACGCTGGTC 
GACAAGCTGC TTCAGCAGTC TGGCACCTTC CGCGAAAACC AGCGGGTCGA GGAGCGGGCG
ATGGACTCCA ACGACCTCGA GAAGGAGCGT GGCATCACGA TCCTGGCCAA GGCGACCTCG
GTCGTCTGGC AGGATACCCG CGTCAACATC GTCGACACCC CCGGCCACGC CGATTTCGGC
GGTGAGGTCG AGCGTATCCT CTCGATGGTC GACGGCGTGA TCGTGCTGGT CGACGCCGCC
GAGGGCCCGA TGCCGCAGAC CAAGTTCGTG GTCGGCAAGG CGCTCAAGAT CGGCCTTCGC
CCGATCGTGG CCATCAACAA GGTCGATCGT CCCGATGCGC GCATCAACGA GGTCGTGAAC
GAGGTGTTCG ACCTGTTCGC GGCGCTCGAC GCCACCGACG AGCAGCTCGA CTTCCCGATC
CTCTACGGTT CGGGCCGCAA CGGCTGGATG GCCGATTCGC CGGACGCCTC GCCGGATGTC
GGCCTCGCGC CGCTGTTCGA TCTCGTGCTC AAGCACGTGC CGCAGGCCCG CGTCGAGGAC
GGTCCGTTCC GGATGCTCGG CACCCTGCTC GAAGCCAACC CCTTCCTCGG CCGCATCATC
ACCGGGCGCA TCGCCTCGGG CACGGTGAAG CCGAACCAGT CGATCAAGGT GCTCTCGCGC
GACGGCAAGG TCGTGGAGAC CGGACGCGTC TCGAAGATCC TGGCCTTCCG CGGCCTGGAG
CGCGCGCCGA TCGATATCGG CGAGGCGGGC GACATCGTCT CCATCGCCGG TCTGCTCAAG
GGCACCGTGG CGGATACCTT CTGCGATCCG GCCGTGAACG AGCCGATCCA GGCCCAGCCG
ATCGATCCGC CGACCGTCAC CATGTCCTTC ATCGTCAACG ATTCGCCGCT GGCCGGCACC
GAGGGCGACA AGGTCACGAG CCGCATGATC CGCGACCGCC TGTTCAAGGA GGCCGAGGGC
AACGTCACGC TCAAGATCGA GGAAGCCGCC GACAAGGACT CGTTCTACGT CTCCGGCCGC
GGCGAGCTGC AGCTCTCGAT TCTGATCGAG ACCATGCGCC GCGAGGGCTT TGAAATTGCC
GTGTCGCGTC CGCGCGTCGT CCTGGAGAAG GACGAGGCCG GCGAGATCCT GGAGCCGGTC
GAAGAGGTCG TGATCGACGT CGACGAGGAG TATTCGGGCG TCGTCGTGCA GAAGATGTCC
GAGCGCAAGG CCGAGATGAT CGAGATGCGG CCCTCGGGCG GCAACCGTCT CCGGCTCGTC
TTCCACGCTC CGACCCGCGG CCTCATCGGC TACCAGGGCG AGCTGATGAC CGACACCCGC
GGCACCGCGA TCATGAACCG CCTGTTCAAG GCCTACGAGG CCTACAAGGG CGAGATCGCC
GGCCGCCGCA ACGGCGTGCT GATCTCGAAC GACAAGGGTG AGGCCGTGGC CTACGCCATG
TGGAACCTCG AAGACCGCGG CCCGATGATG ATCGAGCCCG GCGCCAAGGT CTATCAGGGC
ATGATCGTCG GCGAGCACAA CCGCGAGAAC GACCTCGAGG TGAACGTGCT CAAGGGCAAG
AAGCTCACCA ACATCCGCAC CACTTCGAAG GACGAGGCCG TGCGTCTGAC GCCGCCGATC
CGGATGACGC TGGAGAAGTC GCTGGCCTGG ATTCAGGACG ACGAGCTGAT GGAAGTCACG
CCGAAGTCGA TCCGCCTGCG TAAGATCCAC CTCGACCCGA ACGAGCGCAA GCGCTTCGAG
CGCTCGAAGG AAGCGCTGAC GGGCTAA
 
Protein sequence
MKLRNIAIIA HVDHGKTTLV DKLLQQSGTF RENQRVEERA MDSNDLEKER GITILAKATS 
VVWQDTRVNI VDTPGHADFG GEVERILSMV DGVIVLVDAA EGPMPQTKFV VGKALKIGLR
PIVAINKVDR PDARINEVVN EVFDLFAALD ATDEQLDFPI LYGSGRNGWM ADSPDASPDV
GLAPLFDLVL KHVPQARVED GPFRMLGTLL EANPFLGRII TGRIASGTVK PNQSIKVLSR
DGKVVETGRV SKILAFRGLE RAPIDIGEAG DIVSIAGLLK GTVADTFCDP AVNEPIQAQP
IDPPTVTMSF IVNDSPLAGT EGDKVTSRMI RDRLFKEAEG NVTLKIEEAA DKDSFYVSGR
GELQLSILIE TMRREGFEIA VSRPRVVLEK DEAGEILEPV EEVVIDVDEE YSGVVVQKMS
ERKAEMIEMR PSGGNRLRLV FHAPTRGLIG YQGELMTDTR GTAIMNRLFK AYEAYKGEIA
GRRNGVLISN DKGEAVAYAM WNLEDRGPMM IEPGAKVYQG MIVGEHNREN DLEVNVLKGK
KLTNIRTTSK DEAVRLTPPI RMTLEKSLAW IQDDELMEVT PKSIRLRKIH LDPNERKRFE
RSKEALTG