Gene Mchl_1170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_1170 
Symbol 
ID7117864 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp1182489 
End bp1183736 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content68% 
IMG OID643523950 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_002419986 
Protein GI218529170 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.147511 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGCCG AAGCGATTGA GAATCCGGGA TTGACCGGCC CGCCCGAAGT TGCCGTGACG 
GCACCGGCCC AAGCGCGCGG ACAAGCCTCC CCGGCCCTGG CGGTGCTCCT GGGCCTCAGC
CTCTCGCATC TCCTCAACGA TCTCGTGCAG TCGCTTCTGC CGGCGCTCTA TCCCCTGCTC
AAGGCAGGCT TCCACCTCGA TTTCGGGCAG ATCGGCCTCA TCACCTTCGT GTTCCAGGGC
ACGGCTTCGC TGCTCCAGCC GGCGGTCGGC CTCTACACCG ACCGGCGCCC GCTGCCCTAC
TCGCTGGCCG TCGGCATGGT GCTGTCGCTG GCCGGGCTCG CCCTGTTGTC GGTGGCGTCG
GCCTACGGGG CCCTGCTCGC CGCCGCGGCG CTGATCGGGC TCGGCTCCGC CATCTTCCAT
CCCGAGGCGA GCCGGGTGGC GCGGCTCGCC TCCGGCGGCC GCTACGGTCT GGCGCAGTCG
GTGTTCCAGG TCGGCGGCAA TGCCGGCACG GCACTCGGGC CGTTGCTCGC CGCCTTCGTC
GTGGTGCCGC ATGGCCAGGG CAGCGTCGCG TGGTTCTGCC TCGCCGCGCT CGCCGGCATC
CTCGTGCTCG GCACGGTCGG CCGCTGGTAC GCGCAGCGGC TCGCCACGAC GCCGCGAACC
GCAGGGAAGA GCACGGGCGC CGCCTCCGGC GGCCTCAGCC GGGTGCGGAT CGTGGCGACG
ATCGCGATCC TGCTGGGGCT GATCTTCTCC AAATACTTCT ACATGGCGAG TTTTTCGTCT
TACTACACGT TCTACTTGAT TCACCGCTTC GGCGTGCCGG TGGCGCTCGC GCAGGTCTAC
CTGTTCGTCT TCCTCGGAGC GGTGGCGGCG GGGACGATTC TCGGCGGCCC CATCGGTGAC
CGATTCGGGC GCAAGCTCGT GATCTGGATC TCGATTCTCG GCGTGCTGCC GTTCGCGCTC
GCCCTGCCGC ACGTAAATCT GTTCTGGACG GTGATTCTCT CGATGCCGAT CGGCTTGATT
CTGGCGTCCG CCATGCCGGC GATTCTGGTC TATGCACAGG AATTGTTGCC GGGCCGGATT
GGGCTCGTCG GCGGCCTGTT CTTCGGCTTC GCCTTCGGCA TGGGCGGTCT CGGCGCCGCG
CTGCTCGGGG AGATGGCCGA CCATGTCGGC ATCGAGCGGG TCTACGATCT CTGCGCCTTC
CTTCCCGCGC TGGGATTGAT GGCGGTGTTC CTGCCGCGGC TGCGGTAA
 
Protein sequence
MRAEAIENPG LTGPPEVAVT APAQARGQAS PALAVLLGLS LSHLLNDLVQ SLLPALYPLL 
KAGFHLDFGQ IGLITFVFQG TASLLQPAVG LYTDRRPLPY SLAVGMVLSL AGLALLSVAS
AYGALLAAAA LIGLGSAIFH PEASRVARLA SGGRYGLAQS VFQVGGNAGT ALGPLLAAFV
VVPHGQGSVA WFCLAALAGI LVLGTVGRWY AQRLATTPRT AGKSTGAASG GLSRVRIVAT
IAILLGLIFS KYFYMASFSS YYTFYLIHRF GVPVALAQVY LFVFLGAVAA GTILGGPIGD
RFGRKLVIWI SILGVLPFAL ALPHVNLFWT VILSMPIGLI LASAMPAILV YAQELLPGRI
GLVGGLFFGF AFGMGGLGAA LLGEMADHVG IERVYDLCAF LPALGLMAVF LPRLR