Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mchl_1057 |
Symbol | |
ID | 7118560 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium chloromethanicum CM4 |
Kingdom | Bacteria |
Replicon accession | NC_011757 |
Strand | - |
Start bp | 1072449 |
End bp | 1073129 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643523848 |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_002419890 |
Protein GI | 218529074 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.495081 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGAAG GAACTTCCCG GACAGCTCCG TCCCGCTCGC GCGAGGGCCG AATTCCCGAG GGCGCGCGCC AACACCTGGG CTCCGAGTTG CGTAGCTACT ACGCCTCCAT GCTGGCCGAG GTGCAGCCAT CGACGCTGCT GGAACTGATC GCGCGGCTCG ACGGCGCTCC GTACGCCAGG GAGGCTGCAG ACTTCCGAGA CAGGCTCCTC GCGTCTCTTC CGGGCCTGCG TGCCTTCGCG CTGTCTCTTG CCGTGAACCA TGCTGTCGCC GACGACCTGG TGCAGGAGAC CTTGCTCAAG GCGTGGAAGA ACCAGGACAG GTTCGAGCCT GGCAGCAACT TGCAGGCATG GCTCTGCACC ATTCTGCGCA ACCAGTTCTA CACTGACATC CGCAAGCGGA AGCGCGAGGT CGAGGACGCC GACGGGACCA TGGCCGGCCA AATGGTGGCA TCGGCTGCTC AAGAAGCCAA CAGCGAGCTG CAGCAGGTCA AGCAGCACCT TGCTAAGCTG CCGGCGGCCA TGCGCGAGGC GCTGCTGCTT GTGGGCGCCC AGGGCCTGAC CTACGAGGAC GCCGCCGAGC TCATCGGCTG CCAAGTCGGC ACTGTGAAGA GCCGCGTGAG TCGGGCCCGT GCCCTTCTGG CAAGATCGCT GGGCATGGAC ACGCGCAGCA CTGCGCTTTG A
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Protein sequence | MAEGTSRTAP SRSREGRIPE GARQHLGSEL RSYYASMLAE VQPSTLLELI ARLDGAPYAR EAADFRDRLL ASLPGLRAFA LSLAVNHAVA DDLVQETLLK AWKNQDRFEP GSNLQAWLCT ILRNQFYTDI RKRKREVEDA DGTMAGQMVA SAAQEANSEL QQVKQHLAKL PAAMREALLL VGAQGLTYED AAELIGCQVG TVKSRVSRAR ALLARSLGMD TRSTAL
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