Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mchl_1019 |
Symbol | |
ID | 7118522 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium chloromethanicum CM4 |
Kingdom | Bacteria |
Replicon accession | NC_011757 |
Strand | - |
Start bp | 1038850 |
End bp | 1042014 |
Gene Length | 3165 bp |
Protein Length | 1054 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643523815 |
Product | heavy metal efflux pump, CzcA family |
Protein accession | YP_002419857 |
Protein GI | 218529041 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3696] Putative silver efflux pump |
TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.797494 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCGCGC GCCTCATCGG GTGGTCGGCC CGCAACCTCG TCCTGGTGCT GATCGGGACC GTCTTCGTGG TGGCGGCGGG TCTCTACAGC GTACGAACCC TGCCGCTGGA CGCCATCCCG GACCTCTCGG ATGTGCAGAC CATCGTCTAC ACCGAGTACC CGGGGCAGGC GCCCCAGGTC GTCGAGGACC AAGTCACTTA CCCGCTCACC ACCGCCATGC TGACGGTGCC GAGGTCGAAG GTAGTGCGCG GCTTCTCGTT CTTTGGCGTT TCCTTCGTCT ACGTCATCTT CGAGGACGGC ACCGATCCCT ACTGGGCGCG CTCGCGCGTG CTTGAATACC TAAGCGCGGC CGGCAAGCGC CTGCCGGCCG GCGTGACGCC GACGCTCGGC CCCGACGCGA CGGGTGTGGG CTGGGTCTAC CAGTACGCCA TCGTGGCCAA GCAGCAGACG CTCGCCGAGC TGCGCTCGCT GCAGGACTGG GTGGTGCGCT TCGGCGCCTC GCGCGCCGCG GGGGTGGCCG AAGTCGCGGG CGTCGGCGGC TTCGTGAAGC AGTACAACGT CGTCGTCGAT CCGAACCGGC TGCGCGCTCA GGGCATCAGC CTCAGCAAGC TCCGCGACGC GATCCGGTCG AGCAACGCGG ACGTCGGCGG CCGTACGGTC GAGCTCTCCG AGTTCGAGTT CATGGTGCGC GGGCGCGGTT ACCTGAAGAG CGTCGCCGAC ATCGAGAACA TCGCGCTGCA GACCGAGGCC GGCACCCCGC TGCGTGTCCG GGATGTCGCC CGGGTCGAAC TCGGGCCGGA CGAGCGGCGC GGCATTACCG AGATGAACGG TGAAGGCGAG GTCGCCGGCG GCATCGTGCT GCAGCGCTTC GGCGCCAACG CCCTCAACGT CATCGAGGGC GTCAAGCAGC GCCTGGCCGA GGTTGCCGCG AGCCTGCCGA AGGGCACCGA GATCCTTCCG GTCTACGACC GCTCGCAGCT GATCGAGGCG GCCATCGACA CTCTGAAGCA CACGCTGGTC GAGGAGAGCG TCATCGTGGC GCTCGTCTGC ATCGTGTTCC TGCTGCACCT GCGCAGCGCG CTGGTGGCCA TCCTGATGCT GCCCGTCGGC ATCCTGATGG CGTTGGGGGC CATGCATCTA CTCGGAATCG GCGCCAACAT CATGAGCCTG GGCGGCATCG CCATCGCGGT CGGCGCCATG ATCGACGCCG CCATCGTGAT GATCGAGAAC GCCCACAAGC ACTTGGAGCG GGCGGCTCCG GGCAAGCCTC GGGTCGAGAT CCTGGTCGAG GCGGCGGCAG AGGTCGGCCC GTCGCTGTTC TTCTCCCTCC TCGTGATCAC GGTGAGCTTC CTGCCGATCT TCACCCTGGA GAGCCAGGAA GGGCGCCTGT TCGGCCCGCT CGCCTTCACC AAGACCTTCG CCATGGCTGC CGCGGCGCTC CTGTCGGTGA CCTTGGTGCC GGCCCTGATG GCGCTGTTCG TGCGCGGGCG CATCATCCCC GAGCATCGCA ACCCGCTGAA CCGGCTGCTG ATTTGGGTCT ACCGTCCGAT CATTCACGGG GTCCTCAGGG CCAAGGTGCT GACCATCCTG CTGGCGGTGG CGGCGCTCGG CCTGACCCTC TGGCCGGCGC GCCAGCTCGG CTCCGAGTTC ATGCCTGACC TGAACGAAGG CACCCTGATG TACATGCCCA CCACGCTGCC GGGCATCTCG GTGACCCAGG CCGGAGAGTT GCTGGCGACG CAGGACCGCA TCATCAAGTC CTTCCCGGAG GTGGCCTCCG TCTACGGCAA GGCGGGGCGC GCCTCGACGG CGACGGACCC AGCCCCCACC GAGATGTTCG AGACCATCAT CAGCCTGAAA CCGAAGGCGG AGTGGCGTCC CGGCATGACG CTGGCCACCC TCAAGGCAGA TATGGACCGA GCGCTGCAGT TCCCGGGCGT GTCGAATGCC TGGACGCAGC CGATCCGGGC CCGTATCGAC ATGCTCTCGA CCGGCATCCG CACGCCGGTG GGCATCAAGG TCTACGGCAC TGACCTGACC AAGATGGAGA AGGTCGCCCG ACAAATCGAG GCGGTCGTGC GCAACGTGCC GGGCACGTCG AGCGCCTACG CCGAGCGGGT CATCGGCGGC TACTTCCTCG ACATCACGCC GGACCGGGAG GCGCTCGGGC GCTACGGCCT GATGGTCGGG GACGTGCAGG ACGTCATCGC GACCGCCCTC GGCGGGCAGA GTGTCACCAA CACCGTGGAG GGCCGCGAGC GCTACACCGT GAACGTGCGC TATCCCCGCG CCTTCCGCTC GGATCCGCAA TCCATCGCCA CCGAAGTGCA GGTGCCGCTG CCAGCCGGCG GCACGGTTCC GCTGGGCGAG GTGGCCAAGG TCGAGCTTAC CCGCGGGCCG ACGTCGATCC GCACCGAGAA CGGGCAGCTC GCGGTGTACA TCTTCGTCGA CCTGGCCGGG CGCGATCTCG GCGGCTACGT CGCCGAGGCC CGGGACGCAG TCAACAAGGA GGTCCGGCTT CCGCAGGGCA TGAGCGTCCA GTGGAGCGGT CAGTTCGAGT ATCTGGAACG AGCGGAAGCC AGGCTGAAGA TCGTCGTGCC CGTGACCCTG CTGATCATCT TCCTACTTCT CTACCTGAAC TTCCGGCGTC TGGCCGAGAC GTTCATCGTG ATGCTGTCGC TGCCCTTCGC CCTGGTCGGC GGAGTGTGGC TGCTCTGGTG GATGGGCTTC AACATGTCGG TCGCGGTGGC GGTTGGCTTC ATCGCCCTGG CCGGCGTCGC GGCGGAGACC GGCGTGATCA TGCTGGTCTA TCTCGACCAT GCCTGGGACG AGGTCCGGGC CACGTGCGAG CGCGAAGGCC GGCCGCTCAC GCGTGCAGAC CTGCGGCAGG CGATCATGGT TGGCGCCGTC GAGCGGGTGC GCCCGAAGAT GATGACAGTC GTCGCCATCA TGGCGGGCCT GCTGCCCATC CTCTGGAGCA CCGGGGCGGG GTCGGAGGTC ATGCAGCGCA TCGCAGTGCC GATGATCGGC GGAATGGTTT CCTCCACGGT GCTGACCCTT GTCGTGATCC CGGCCATCTA CGGGCTGGTG AAGGGACGGG GACTGCCGCA TCGGCAGGAA ACGTCGGCCG CCGTGCGGAC CGGACTCCCC CGGGCCGCCG AGTAG
|
Protein sequence | MIARLIGWSA RNLVLVLIGT VFVVAAGLYS VRTLPLDAIP DLSDVQTIVY TEYPGQAPQV VEDQVTYPLT TAMLTVPRSK VVRGFSFFGV SFVYVIFEDG TDPYWARSRV LEYLSAAGKR LPAGVTPTLG PDATGVGWVY QYAIVAKQQT LAELRSLQDW VVRFGASRAA GVAEVAGVGG FVKQYNVVVD PNRLRAQGIS LSKLRDAIRS SNADVGGRTV ELSEFEFMVR GRGYLKSVAD IENIALQTEA GTPLRVRDVA RVELGPDERR GITEMNGEGE VAGGIVLQRF GANALNVIEG VKQRLAEVAA SLPKGTEILP VYDRSQLIEA AIDTLKHTLV EESVIVALVC IVFLLHLRSA LVAILMLPVG ILMALGAMHL LGIGANIMSL GGIAIAVGAM IDAAIVMIEN AHKHLERAAP GKPRVEILVE AAAEVGPSLF FSLLVITVSF LPIFTLESQE GRLFGPLAFT KTFAMAAAAL LSVTLVPALM ALFVRGRIIP EHRNPLNRLL IWVYRPIIHG VLRAKVLTIL LAVAALGLTL WPARQLGSEF MPDLNEGTLM YMPTTLPGIS VTQAGELLAT QDRIIKSFPE VASVYGKAGR ASTATDPAPT EMFETIISLK PKAEWRPGMT LATLKADMDR ALQFPGVSNA WTQPIRARID MLSTGIRTPV GIKVYGTDLT KMEKVARQIE AVVRNVPGTS SAYAERVIGG YFLDITPDRE ALGRYGLMVG DVQDVIATAL GGQSVTNTVE GRERYTVNVR YPRAFRSDPQ SIATEVQVPL PAGGTVPLGE VAKVELTRGP TSIRTENGQL AVYIFVDLAG RDLGGYVAEA RDAVNKEVRL PQGMSVQWSG QFEYLERAEA RLKIVVPVTL LIIFLLLYLN FRRLAETFIV MLSLPFALVG GVWLLWWMGF NMSVAVAVGF IALAGVAAET GVIMLVYLDH AWDEVRATCE REGRPLTRAD LRQAIMVGAV ERVRPKMMTV VAIMAGLLPI LWSTGAGSEV MQRIAVPMIG GMVSSTVLTL VVIPAIYGLV KGRGLPHRQE TSAAVRTGLP RAAE
|
| |