Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mchl_0677 |
Symbol | |
ID | 7115493 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium chloromethanicum CM4 |
Kingdom | Bacteria |
Replicon accession | NC_011757 |
Strand | - |
Start bp | 668006 |
End bp | 669862 |
Gene Length | 1857 bp |
Protein Length | 618 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643523470 |
Product | ABC transporter related |
Protein accession | YP_002419527 |
Protein GI | 218528711 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.021842 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0281361 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTCCTCG ATTGGCTCGA GCGCCGCATC GATCCGTTCG CGCCCTTCGA CGACCGGCGT GTGCCGCCGA AGACGGTGCT CGGTTTCGCA GGTTTCTATC TGCGGCCGAT CCGCTTCGCG CTGCTGGCCC TGTTCGTCAT CGCCGTGGTC GCGGGCGGGA TCGAGGCGTC GCTCTACCTG CTCATGCGCT GGTTCATCGA CCTGATGAAC GCGGCCGACC GCACCACCGT GCTGAGCGAC AATGCCGTGC CGCTGACGCT CGCCGCGCTG CTGCTCCTCG TGGTGCGCCC GCTGGCGGCC TTCCTGCACG AGTTGGCCTC GAACCAGCTC ATCGTGCCGC AATCGACCAA CCAGATCCGC TGGCGGACCC ACCTCTACAC GCTGGGCCAC TCGCTCTCGT ACTTCCAGGC GGATTTCGCC GGGCGGCTCG CCAACCGCAC GGTGCAGGTC GGGCCGGCGG TGCGCGAACT CGCCGTCGTG TTCATCGACA CGCTGCTCTA CGTGGCGATC TACGCGGTCA CCGCAATCGG GCTGTTCTCC TCGATCTCCG GCTGGCTGGC GCTTCCCGTC GTCCTCTGGG TGGTGGCCTA TGCTGGGCTG ACGGCGTGGT TCGTGCCGCG CGCCCGCAAG CGCTCGCACC TCACCGCCGA GACCCGCTCA ACCCTGATCG GCCGGGTGGT CGACAGCTAC ACCAACATCC TCACCGTTAA GCTGTTTGCC CGCGACCGCG AGGAGCGCGC CACCGTGCGC GATGCGGTCG ATACCCACAC GCGGGCCTAT CTCCACCAGT TCCGGCTCAC CACGCTGACG ACGAGCCTGC TGGCGGGGCT CAACAGCCTG CTTCTGTTCG CCACCGCGGC CGTCTGCTTC GCGCTGTGGC AGCGCGGTGC GCTGACGACC GGCGAAGCCT CGGCCGGCCT CGCGCTGATC CTGCGGCTGA TGGCGATGTC GGGCTGGGTG ATGCAAACCG TGCGCGGCGT GTTCGAGAAT GTCGGCGTGA TCCAGGAGAG CATGCAGACC ATCGCCCGTC CGCACGGACT CACCGATGCG CCCGATGCGA AGACGCTTCA GGTCACCGGC GGCGAGATCC GCTTCGAGAA CGTGGATTTC CACTACGGGC GGGGCGATGC CAGCATCATC GAGGATCTGT CGTTCCAGAT CCGCCCCGGC GAAAAGGTAG GGCTCGTCGG TGTCAGCGGC GCGGGCAAGA GCACCATCAC CGCGCTGCTG CTGCGCCTGC ACGACGTCGA GGGCGGTCGC ATCCTGATCG ACGGCCAGGA CATCGCTGGG GTGACGCAGG ATTCCCTGCG CCAAGCCATC GCCATGGTCA GCCAGGACAC CTCGCTGCTG CACCGCTCGA TCCGCGACAA CATCGGCTAC GGTCGCCCGG ATGCCACCGA CGCCGAGATC GAGCAGGCGG CGCGGCTGGC GCATGCCCAC GAGTTCATCC TCGACCTCGT GGACCACAAG GGCCGGCGCG GCTACGACGC CCATGTCGGC GAGCGCGGGG TGAAGCTCTC GGGCGGGCAG CGCCAGCGCA TCGCGATTGC CCGCGTCATC CTGAAGGACG CGCCGATCCT GATCCTCGAC GAGGCGACGA GTGCCCTCGA CAGCCAAGTC GAGGCGGCGA TCCAGGAGGC GCTCGACACG CTGATGGGCG ACAAGACCGT GCTGGCCATC GCCCACCGGC TCTCGACCAT CGCCGCGCTT GACCGGCTGA TCGTGATCGA CAGCGGTCGG ATCGTCGAGG AGGGCACCCA CGCCGAACTG ATCCGCCGGG GCGGGCTCTA CGCCGACCTG TGGCGGCGCC AATCCGGCGG CTTCCTGGGG GATCGGGCGC CGGCTCCGGC CTCCTGA
|
Protein sequence | MFLDWLERRI DPFAPFDDRR VPPKTVLGFA GFYLRPIRFA LLALFVIAVV AGGIEASLYL LMRWFIDLMN AADRTTVLSD NAVPLTLAAL LLLVVRPLAA FLHELASNQL IVPQSTNQIR WRTHLYTLGH SLSYFQADFA GRLANRTVQV GPAVRELAVV FIDTLLYVAI YAVTAIGLFS SISGWLALPV VLWVVAYAGL TAWFVPRARK RSHLTAETRS TLIGRVVDSY TNILTVKLFA RDREERATVR DAVDTHTRAY LHQFRLTTLT TSLLAGLNSL LLFATAAVCF ALWQRGALTT GEASAGLALI LRLMAMSGWV MQTVRGVFEN VGVIQESMQT IARPHGLTDA PDAKTLQVTG GEIRFENVDF HYGRGDASII EDLSFQIRPG EKVGLVGVSG AGKSTITALL LRLHDVEGGR ILIDGQDIAG VTQDSLRQAI AMVSQDTSLL HRSIRDNIGY GRPDATDAEI EQAARLAHAH EFILDLVDHK GRRGYDAHVG ERGVKLSGGQ RQRIAIARVI LKDAPILILD EATSALDSQV EAAIQEALDT LMGDKTVLAI AHRLSTIAAL DRLIVIDSGR IVEEGTHAEL IRRGGLYADL WRRQSGGFLG DRAPAPAS
|
| |