| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_0525 |
|---|
| Symbol | |
|---|
| ID | 7114681 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium chloromethanicum CM4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011757 |
|---|
| Strand | + |
|---|
| Start bp | 521087 |
|---|
| End bp | 521842 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 643523321 |
|---|
| Product | diguanylate phosphodiesterase |
|---|
| Protein accession | YP_002419385 |
|---|
| Protein GI | 218528569 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2200] FOG: EAL domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCGCG CCCAATGCCA AGGCTGCCGA GACGGCGCGC TGCTGCCGTT CGACTTCACC
ATGGCCTTTC AGCCCATCGT TGATCTTGGC CAGAACCGGA TCTGGGGCTA CGAGGCTCTG
GTACGGGGCG CGGAGGGACA GGGAGCGGGC TGGGTCCTCG GGCAAGTGAA CGAGGCAAAC
CGGTACAAAT TCGACCAAGC CTGCCGTGTG AAGGCCATCG AGCTTGCCGG TCAGCTGTTC
CAGGATGCCG AGACTCGGCT GTCCATCAAC TTCATGCCCA ACGCTGTTTA CGAGCCAGCC
GCTTGCATCC GTGCGACGCT CCAGGCCGCG CAACGCGTTG GCTTCGCGCA CGATCAGATC
ATGTTCGAGT TCACCGAAAA CGAGCGCATG GTCGATGTCC CGCATGTGCA GCGGATCATC
ACCGAATACC GCAAGCAGGG CTTCCTGACG GCGCTCGACG ACTTCGGTGC CGGCCATGCG
GGGCTCAACT TGCTGGCGAA CTTCCAGACC GACCTGATCA AGCTGGACAT GGAGCTGATC
CGCGGCATTG CGACCTCGCC GACACGGCAG ACCATCATCG CCTGCGTCAC AACGATGGCG
CGTGAGCTCG GCATTACAGT TATGGCGGAG GGTGTGGAGA GTGAGGCCGA GCTGACGGCG
CTAAGGGCCG CCGGTATCCG GCTGTTCCAA GGCTACTACC TGGCCAAGCC TGCCCTCGCC
ATGCTCCCTG ACGTGCACTT GGCTGTTGCA GCTTAG
|
|---|
| Protein sequence | MTRAQCQGCR DGALLPFDFT MAFQPIVDLG QNRIWGYEAL VRGAEGQGAG WVLGQVNEAN
RYKFDQACRV KAIELAGQLF QDAETRLSIN FMPNAVYEPA ACIRATLQAA QRVGFAHDQI
MFEFTENERM VDVPHVQRII TEYRKQGFLT ALDDFGAGHA GLNLLANFQT DLIKLDMELI
RGIATSPTRQ TIIACVTTMA RELGITVMAE GVESEAELTA LRAAGIRLFQ GYYLAKPALA
MLPDVHLAVA A
|
|---|
| |