Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mchl_0323 |
Symbol | |
ID | 7118622 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium chloromethanicum CM4 |
Kingdom | Bacteria |
Replicon accession | NC_011757 |
Strand | + |
Start bp | 303781 |
End bp | 304482 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643523122 |
Product | HAD-superfamily hydrolase, subfamily IA, variant 1 |
Protein accession | YP_002419188 |
Protein GI | 218528372 |
COG category | [R] General function prediction only |
COG ID | [COG0546] Predicted phosphatases |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.0341719 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCTCAAGC TGATCGTCTT CGATGTCGAT GGCACCCTCA TCGACAGCCA GCACCTGATC GTGGAGGCGC AGCACCGCGC CTTCTCCGAG CATGGCTTGG TAGCCCCGCC GCGCAAGGAG GCGTTGTCCG TGGTCGGGCT GTCCCTGCCC GAAGCGTTCC GTCGCCTCGT TGGCGAAGCC GGCCCAATCG AGTCGCTCGC GCACAGCTAT CGCAAGGCGT TCCAGGCGTT GCGGGTCGAT CCCGACTACG AGGAGCCGCT GTTCCCGGGC ATGGCCGAGT TGGTCGAGCG GCTGCACCGC CGCGACGACA TCCAGCTCGG CATCGCCACC GGCAAGTCAC GCCGCGGCGT CAATCATCTC GTGGACAAGT ACGGTTGGGA GCGCTGGTTC GCCACGATCC AGACCGCCGA CGACGCCCCC TCCAAGCCCG ATCCGGCCAT GCTGCTTCAG GCCATGGCCG AGACCGGCGC CGAACCGTCG ATGACGGTGA TGATCGGCGA CACGACCTTC GACATGATGA TGGCCCGGAG CGCGAGCGTG GCCGCCATCG GCGTCGGCTG GGGCTATCAC ACCCCCGGCG CGCTGTTCAG CGCGGGTGCG GTCACGGTCG TCGATTCGGC GGCGACCTTG AGCGACCTGT TCTCCGGCCC CCTAGACGAT TCGCAGCCCG GCCCGGTGAC GGAACGGCTC GCGACACAAT AG
|
Protein sequence | MLKLIVFDVD GTLIDSQHLI VEAQHRAFSE HGLVAPPRKE ALSVVGLSLP EAFRRLVGEA GPIESLAHSY RKAFQALRVD PDYEEPLFPG MAELVERLHR RDDIQLGIAT GKSRRGVNHL VDKYGWERWF ATIQTADDAP SKPDPAMLLQ AMAETGAEPS MTVMIGDTTF DMMMARSASV AAIGVGWGYH TPGALFSAGA VTVVDSAATL SDLFSGPLDD SQPGPVTERL ATQ
|
| |