Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mchl_0010 |
Symbol | |
ID | 7114069 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium chloromethanicum CM4 |
Kingdom | Bacteria |
Replicon accession | NC_011757 |
Strand | + |
Start bp | 9896 |
End bp | 12097 |
Gene Length | 2202 bp |
Protein Length | 733 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643522837 |
Product | helicase, RecD/TraA family |
Protein accession | YP_002418908 |
Protein GI | 218528092 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
TIGRFAM ID | [TIGR01448] helicase, putative, RecD/TraA family |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.381195 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.357387 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATACGC CCCTCCGCTC CTCGGCCGTC GATGGTGCCG CGTCCCTCGA CATGCTCGCC GGCTCGGTCG AGCGGGTGAC GTTCCACAGC GCCGAGACCG GCTTCTGCGT CCTCAAGGTC CATGCCCGCG GCCGGCGCGA CCTCGTGCCG GTGGTGGGCC ATGCGCCCGC CATCGCCGCC GGCGAGTGGC TGACGGCTTC CGGGCGATGG GTCACGGACC GTGAGCACGG CCTCCAGTTC CGCGCCGACA CGCTCCAAGT GACGCCGCCC ACGGGGATCG AGGGCATCGA GCGCTACCTC GCATCCGGGC AGATGCGCGG CATCGGCCCG ATGATGGCCA AGCGCATCGT CGCCCGCTTC GGGGAGGCGG TGTTCGAGAT CATCGAAGCC GAGCCCGCCC GCCTCACCGA GGTCGAGGGC ATCGGCCGCA AGCGCGCCGC GCGCATCGTC AAGGGCTGGG CCGAGCAGAA GGCCGTGCGG GAGATCATGA TCTTCCTGCA CGCCCACGGC GTCGGCACCG CTCGGGCGAC CCGGATCTTC CGCACCTATG GCGGGGATTC CCTGAAGGTC ATGGCCGAGG ATCCCTATCG GCTCGCCCGC GACATCCGCG GCATCGGCTT CCGCACGGCG GACGCCATCG CCCTGCGCCT CGGCCTCGCC CGCGACGCGC CGCAGCGGCT TGCTGCCGGT GTCTCCTACG CACTCCAGAC GGCGATGGAT GAGGGCCATT GCGGGCTTCC CGCCGAGCGG CTGGTGCGCC TCGCTGCCGA GCTTCTCGAC GTCGCGCCCG ATCTCGTCCG GCTCGCCGCG GCGCTCGTCC TGCGCGAGGG CCGCGAGGTC GTCGCGGATA CGCTGCGCGG CGAGCCCTGC CTGTTCCTCA AGGGCCTGCA CGGCGCCGAG CGCGTCATCG CGATGCGGCT GGCCGAGCGC GCCGCCGGCC CCCCACCCTG GGCCGCGATC GACTTCGCGC TGGCCAGGCC CTGGGTCGAG GCGAAGACCG GAAAGACGCT GTCCGCCTCG CAGGCTGAGG CGGTCGGGCT GGTGCTCCGC TCGAAGCTCT GCGTTCTCAC CGGCGGCCCC GGCGTCGGCA AGACCAGCAC CCTCGACGCG ATCCTGCGCA TCCTCACCGC CAAGGGCGTA CGGGTGCTGC TCGCCGCCCC CACCGGCCGC GCGGCCAAGC GCATGGCCGA GCAGACCGGG CTGGAAGCAC GCACGCTCCA TCGCCTGCTG GAGATCGACC CGCGCAATGG CGGCTTTCAG CGCAACGAGG AAAACCCGCT CGATTGCGAT CTCCTCGTCA TCGACGAGAC CTCAATGGTC GACGTGCCGC TGATGCATGC CCTCCTCAAG GCGGTGCCGG AGCGAGCGGG CCTGATCCTC GTCGGTGATG TCGACCAGCT TCCCTCGGTC GGACCCGGAC AGGTGCTGGC CGACGTGATT GCCTCCGGGA CGGTGCCGGT GGCGCGTCTC ACCGAGATTT TTCGTCAGGC GGCGCAGAGC CGGATCGTCG TCAACGCCCA CAGCATCAAC ACCGGGCGGA TGCCGGCTGC GCCCGCCAAG GGCGAAGACA GCGACTTTTA CCTCGTCGAG ATCGAGGACG CGGACGAGGG CGTGGAGACG CTGATCGAAC TCGTCACCCG CCGCATCCCC CGCCGCTTCG GCCTCGATCC CACCCACGAC ATCCAAGTGT TGACGCCGAT GATCCGCGGC TCGCTCGGCA GCCGCAACCT CAACAACGCC CTTCAGCGCG TGTTGAATCC GTCGCCCTCG GCGGAGGTCG AGCGCTTCGG CTGGCGCTTT GCGCCCGGCG ACCGGGTGAT GGAGACCCGC AACGACTACG ACCGCGACGT GTTCAACGGC GACCTCGGTA CGATCAGCGC CATCGATGCG GAGGAAGAGG CGCTCGTTGT CGATTTCGAC GGTCGCGCGG TGATCTACCC CTTCAACGAA CTCGACACGC TGGTGCCGGC CTTCGCCACG ACGATCCACA AGGCGCAGGG CTCGGAATAT CCGGCCGTGG TGATCCCGGT GGTGACCCAG CATCGTACGA TGCTGGCGCG CAACCTGCTC TATACCGGCG TCACCCGCGG GCGCCGCCTC GTTGTGCTGA TCGGCCAGCG CCGGGCCCTT GCGATGGCGG TCCGCGAAGG GGCCTCGCGG CGGCGCTGGA CCAAGCTGCG AGAGTGGCTG GACGCCGCCT GA
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Protein sequence | MNTPLRSSAV DGAASLDMLA GSVERVTFHS AETGFCVLKV HARGRRDLVP VVGHAPAIAA GEWLTASGRW VTDREHGLQF RADTLQVTPP TGIEGIERYL ASGQMRGIGP MMAKRIVARF GEAVFEIIEA EPARLTEVEG IGRKRAARIV KGWAEQKAVR EIMIFLHAHG VGTARATRIF RTYGGDSLKV MAEDPYRLAR DIRGIGFRTA DAIALRLGLA RDAPQRLAAG VSYALQTAMD EGHCGLPAER LVRLAAELLD VAPDLVRLAA ALVLREGREV VADTLRGEPC LFLKGLHGAE RVIAMRLAER AAGPPPWAAI DFALARPWVE AKTGKTLSAS QAEAVGLVLR SKLCVLTGGP GVGKTSTLDA ILRILTAKGV RVLLAAPTGR AAKRMAEQTG LEARTLHRLL EIDPRNGGFQ RNEENPLDCD LLVIDETSMV DVPLMHALLK AVPERAGLIL VGDVDQLPSV GPGQVLADVI ASGTVPVARL TEIFRQAAQS RIVVNAHSIN TGRMPAAPAK GEDSDFYLVE IEDADEGVET LIELVTRRIP RRFGLDPTHD IQVLTPMIRG SLGSRNLNNA LQRVLNPSPS AEVERFGWRF APGDRVMETR NDYDRDVFNG DLGTISAIDA EEEALVVDFD GRAVIYPFNE LDTLVPAFAT TIHKAQGSEY PAVVIPVVTQ HRTMLARNLL YTGVTRGRRL VVLIGQRRAL AMAVREGASR RRWTKLREWL DAA
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