Gene Mchl_0004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_0004 
Symbol 
ID7114063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp4428 
End bp5585 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content73% 
IMG OID643522831 
ProductDNA replication and repair protein RecF 
Protein accessionYP_002418902 
Protein GI218528086 
COG category[L] Replication, recombination and repair 
COG ID[COG1195] Recombinational DNA repair ATPase (RecF pathway) 
TIGRFAM ID[TIGR00611] recF protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.615543 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.382944 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACATAC TGCCGGGAGG CCCCCGCCTC ACCCGCCTGA TCGCCCGCGA CTTCCGCAAC 
CACGTCGATC TCGATCTTGC CACCACCCGC CGCTTCGTGG CGCTGGTCGG CGAGAACGGG
GCGGGCAAGA CGAACATCCT CGAAGCGGTC TCGCTGTTCT GCCCCGGTCG CGGCCTGCGC
CGGGCCGATC TCGCGACCAT GGCGCGGGTC GGCGGACCGG GTGGATTCGC TGTGTCGGCG
ACGCTCGAAG CCTCGGAGGC CGAGCACCGG TTCGGGTCCG GCTACGAACC GCCGGGCTAT
GACGGGCGCG GAACGCGGGT CTGCCGGATC GACGGCGCGA ACGCCCCCTC CCCCGTCGCC
TTCTCGGAAT TCCTGCGGAT CGTCTGGCTG ACGCCGGACT TCGACGGGCT GTTCCGCGGC
GCGGCCGGTG ACCGGCGCCG CTTCCTCGAC CGGCTCGTGC TCGCCGTCGA TGCCGGCCAC
GGTGCCCGCG TCTCGGCGAT GGAGCGGGCC CTGCGCTCGC GCAACCGCCT GCTCGACGAG
CGGCCGGATG ACGGCCGCTG GCTCGATGCG GTCGAGCGCG AGGTGGCCGA ACTCGGCGTC
GCCGTAGCGC TCGCCCGGCG CGAGACGGTG GAGCGGCTGG ATCGATTGAT CGCCGAGACG
CGGGACGATG CGGCGCCCTT CCCCTGGGCC TCGCTCCGGC TGGAGGGCGA CCTCGACGAT
CTCGTCGCGG TCTGGCCGGC CTTGGAGGCG GAGGATCGCT TTCGCCGGGC GCTGATGCAG
GGCCGCCACC GCGACCGCGC CGCCGGCCGC ACCCTGATCG GACCGCAGAC CACCGACCTC
GTCGTGCGCC ACGGCCCCAA GGACGTGCCC GCGGCCACGG CTTCGACCGG CGAACAGAAG
GCCCTGCTGA TCGGCCTCGT GCTCGCCCAT GCCCGCCTGG TGCGCGCGAT GAGCGGGCTT
GCGCCGCTCA TCCTCCTCGA CGAGGTCGCC GCGCATCTCG ATCCGCGCCG CCGCGGCGGG
CTGTTCGATG CGCTCGAAGC CTTGGAGGGA CAGGTCTGGA TGACAGGCGC CGACCCGGCC
CTGTTCGCCG AGCTGGAAGG CCGCGCCGAT ATGGTCAACA TTGCAGACGG GCGCATCGTC
GCGTCGGACG CCGGTTGA
 
Protein sequence
MDILPGGPRL TRLIARDFRN HVDLDLATTR RFVALVGENG AGKTNILEAV SLFCPGRGLR 
RADLATMARV GGPGGFAVSA TLEASEAEHR FGSGYEPPGY DGRGTRVCRI DGANAPSPVA
FSEFLRIVWL TPDFDGLFRG AAGDRRRFLD RLVLAVDAGH GARVSAMERA LRSRNRLLDE
RPDDGRWLDA VEREVAELGV AVALARRETV ERLDRLIAET RDDAAPFPWA SLRLEGDLDD
LVAVWPALEA EDRFRRALMQ GRHRDRAAGR TLIGPQTTDL VVRHGPKDVP AATASTGEQK
ALLIGLVLAH ARLVRAMSGL APLILLDEVA AHLDPRRRGG LFDALEALEG QVWMTGADPA
LFAELEGRAD MVNIADGRIV ASDAG