Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbur_2039 |
Symbol | |
ID | 3997421 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcoides burtonii DSM 6242 |
Kingdom | Archaea |
Replicon accession | NC_007955 |
Strand | + |
Start bp | 2146770 |
End bp | 2148548 |
Gene Length | 1779 bp |
Protein Length | 592 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 637959777 |
Product | RNA-directed DNA polymerase |
Protein accession | YP_566665 |
Protein GI | 91773973 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3344] Retron-type reverse transcriptase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.328329 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGACTT ACTCTATGGT ATCAAAACGT ATGAATGAAG GTATAACTAT GAATGTAAGA ATTTCAAATA CACCAAATAA TGAAGCAGAA GCCCTTAGTG GTCATGCTGA ATTAAATGGT GAGAAGCTTA CAGATATGCT CAACTGGAAT TTCATCAATT GGAGTTCCGT TGAATCACAT GTTAATAGAA TACAAGTCAG AATTACGAAA GCAGTTATTA ACAAAAATTG GAATTTAGTA AAAAAACTAA GTTATTTGCT AACCCATTCT CACTATGCTA AACTGTTAGC TGTCAGAAAG GTTATTCGAA ATAAGGGTAG AAGAACAGCA GGAATCGATG GAGAATTCTG GTCAACACCA GTTTCCAAAG TGAATGCGGC TCGAAGTCTA TCTGATAAAA GATATAAGGC AAAACCATTA AAAAGAATCT TTATTGAGAA ATATGGTTCT GATAAGAAGC GACCTTTAGG TATCCCGACC ATGTACGATA GAGCTATGCA AGCATTATAT GCATTAGCAC TTGACCCCAT TGCAGAAGTA ACAGCAGATA AACGTTCTTT TGGATTCAGA AAATTCAGAA GTACACATGA TGCTTGCAGT CAAATTTTTG GAACAATAAG CAAAAAGGAT TCTGCACAAT GTATACTGGA AGGCGATATT AAAGGTTGTT TCGACAACAT CAGTCACCAA TGGTTAATTG ACAATATCCC AATGGATAAA TCAATTCTTA AACAATTCCT CAAAGCAGGA TTTGTTTATG AAAATTCTCT ATTTCCAACG AAAGCAGGAA CACCACAAGG CGGTATTATA TCACCAATAT TAGCCAACAT GACCTTAGAT GGAATTGAAG GTGTATTGGC TGACAAATAT CATCGAGGTG TAAGCGGTAA AATAACAACT CGTCAACGTG CAAAACACAA AGTTAATTTT GTGCGATACG CAGATGATTT TATTGTTACT GCAAAGACTA AAGAAATAGC AGAAGAAGCA AAAGAATTGA TTAAGAATTT CCTAACGGAT AGAGGTTTAG AACTATCTGA TGAAAAAACC CTTATTACTC ACATCGATGA TGGTTTTGAC TTTTTAGGTT GGAATGTCAG AAAATACAAA GGAAAACTTC TCATAAAACC GTCTAAGAAA TCTATCAAGA AAGTAACTGA AAAAATCAGT AATACTATCA AAGATGGAAA AACTTGGACA CAAGAAGATT TAATCTCTAA ACTTAACCCT ATCATAACTG GATGGTCAAA TTATCATCAA GGAGTGGCTT CCAAAGAAAC ATTCTCCTTA ATTGATTTTA AGATATGGAA TATACTTTGG AAATGGGCTA AGAGAAGACA CCCCATGAAA TCAAGAACTT GGATTGCACA CAAATACTGG CATCCCAAAG GAACGAGGAA ATGGGTATTT TCAACAATGA AAAACCAACT TAAATTAATG TCAGATAAAA TGATAGTTCG AAACCCACAA ATAAAACTGG ATAAGAACCC TTACACTGAC ACCGAATACT TTGTTGAACG CAAGCTCAAT CAAGGTTCTA AAAAGTTATT AGGAAAGTTT AAAACCGTAT GGAAGAATCA AAAAGGCAAA TGTCCGTTTT GTAATCTATT GATTGACATT AACAACGGTG GAGAGGAACG CCCTTTACAT CATAAAAATG GAAATCATGA CGATAATGGA ATAACAAACT TAGTTTATGC ACATGTATAT TGTCATAGAC AATATCATGC AAATAATCCA AAAATAACTG TTGCCCGACA AGGGTTAAGA GATGCTTGA
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Protein sequence | MQTYSMVSKR MNEGITMNVR ISNTPNNEAE ALSGHAELNG EKLTDMLNWN FINWSSVESH VNRIQVRITK AVINKNWNLV KKLSYLLTHS HYAKLLAVRK VIRNKGRRTA GIDGEFWSTP VSKVNAARSL SDKRYKAKPL KRIFIEKYGS DKKRPLGIPT MYDRAMQALY ALALDPIAEV TADKRSFGFR KFRSTHDACS QIFGTISKKD SAQCILEGDI KGCFDNISHQ WLIDNIPMDK SILKQFLKAG FVYENSLFPT KAGTPQGGII SPILANMTLD GIEGVLADKY HRGVSGKITT RQRAKHKVNF VRYADDFIVT AKTKEIAEEA KELIKNFLTD RGLELSDEKT LITHIDDGFD FLGWNVRKYK GKLLIKPSKK SIKKVTEKIS NTIKDGKTWT QEDLISKLNP IITGWSNYHQ GVASKETFSL IDFKIWNILW KWAKRRHPMK SRTWIAHKYW HPKGTRKWVF STMKNQLKLM SDKMIVRNPQ IKLDKNPYTD TEYFVERKLN QGSKKLLGKF KTVWKNQKGK CPFCNLLIDI NNGGEERPLH HKNGNHDDNG ITNLVYAHVY CHRQYHANNP KITVARQGLR DA
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