| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbur_1933 |
|---|
| Symbol | |
|---|
| ID | 3997834 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcoides burtonii DSM 6242 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007955 |
|---|
| Strand | + |
|---|
| Start bp | 2029279 |
|---|
| End bp | 2030451 |
|---|
| Gene Length | 1173 bp |
|---|
| Protein Length | 390 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 637959675 |
|---|
| Product | acetyl-CoA acetyltransferase |
|---|
| Protein accession | YP_566564 |
|---|
| Protein GI | 91773872 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.00196536 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAGACG TAGCAATTAT TGGTGTTAAG AACACAAATT TCGGTGAGAT GTGGGATCGA
TCCTTCAGGG ACATCGTTGT CGAAGCAGGT GTCGGAGCGA TTGAGGATTC TGGTATCTCC
GGTGAAAAAC TGGATGGTAT GTACGTTGGT AACATGAGCG GAGGACAGTT TGTAGAACAG
GAGCACATTG GTGCCCTGAT AGCTGATTAT TCCGGTCTTT CCTTAGACCT TCACATTCCA
TCCACACGTG TCGAGGCAGC ATGTGCTTCA GGCGGTCTTG CGTTCAGGCA GGCTGTAATG
GCAGTAGCTT CCGGTCACGA GGACCTTGTG ATGGCAGCAG GCGTGGAAAA GATGACCGAT
GTTTCAGCAA CGGCAGCTTC AGCAGCACTG GCAGCAGCAG CAGACCGCGA ATGGGAAGGC
ATCATGGGTG CGACATTCCC GGGTCTTTAT GCAATGATAG CAAAGATGCA CATGCATCAG
TACGGTACCA CAAGTGAACA GCTTGCGGCA GTTGCTGTGA AGAACCACCA GAATGGATCA
ATGAACCCTA TTGCACAGTA CAAGAGTCGT ATCACCATAG ACAATGTCCT TAATTCTATC
ATGGTGGCTG ACCCATTGCA CATATTCGAT TGTTCACCTA TCACAGACGG TGCATCAGCA
TTGGTACTTG CTCCTGCGGA TATCGCACAC GAGTACACTG ACACTCCTAT CTATGTGAAG
GCGACAGCAC AGGCAAGCGA TACAATTGCT TTGCATGACC GCCGTGACAT CACAACGCTG
GATGCATCCG TAGTTGCAGG AAAGCGTGCT TATGAGATGG CGAAGATGAC CCCTGCGGAC
ATCGATCTTG TGGAAGTTCA CGACTGTTTC ACGATTGCAG AGATATGTGC TATCGAAGAC
CTTGGCTTTG TAAAGAAAGG TCTGGGCGGT AAGATGACCG AAGATGGTGA GACTGCTATT
GGCGGAAAGA TCCCTGTGAA CACTTCCGGT GGCCTGAAAG CATGTGGTCA TCCGGTCGGT
GCTACTGGTA TCAAACAGCT CGTAGAGGTC ACACAGCAAC TTCGTGGGGA TTCAGGTCCT
CGTCAGGTTG ATGGCGCAGA GGTTGGAATG ACCCATAATG TCGGAGGTTC CGGCGCGACA
GCAGTTGTAA ACATCTTAGC GAGGAAGAGG TGA
|
|---|
| Protein sequence | MRDVAIIGVK NTNFGEMWDR SFRDIVVEAG VGAIEDSGIS GEKLDGMYVG NMSGGQFVEQ
EHIGALIADY SGLSLDLHIP STRVEAACAS GGLAFRQAVM AVASGHEDLV MAAGVEKMTD
VSATAASAAL AAAADREWEG IMGATFPGLY AMIAKMHMHQ YGTTSEQLAA VAVKNHQNGS
MNPIAQYKSR ITIDNVLNSI MVADPLHIFD CSPITDGASA LVLAPADIAH EYTDTPIYVK
ATAQASDTIA LHDRRDITTL DASVVAGKRA YEMAKMTPAD IDLVEVHDCF TIAEICAIED
LGFVKKGLGG KMTEDGETAI GGKIPVNTSG GLKACGHPVG ATGIKQLVEV TQQLRGDSGP
RQVDGAEVGM THNVGGSGAT AVVNILARKR
|
|---|
| |