Gene Mbur_1555 details

Gene Information

• Locus tag: Mbur_1555
• ID: 3997791
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanococcoides burtonii DSM 6242
• Kingdom: Archaea
• Replicon accession: NC_007955
• Strand: +
• Start bp: 1635257
• End bp: 1635664
• Gene Length: 408 bp
• Protein Length: 135 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 637959314
• Product: phenylacetic acid degradation-related protein
• Protein accession: YP_566211
• Protein GI: 91773519
• COG category: [Q] Secondary metabolites biosynthesis, transport and catabolism
• COG ID: [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism
• TIGRFAM ID: [TIGR00369] uncharacterized domain 1; [TIGR02286] phenylacetic acid degradation protein PaaD

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.000000594632
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAAAAA TAAAAGAATT TCTCAAAATG GACAGATTTG CAGAACACAT CGATATTAAA 
CTTCTGGAAG TCTCAGAAGG CTATGCAAAA GCAAAAATGG ACATCCACGA ACATCACCTG 
AACGGTGTGG GTATCGTTCA GGGAGGAGCA ATATTTACCC TTGCAGACTT CGCATTTGCT 
GCCGCTTCCA ATTCTCATGG TACGGTTGCA GTCGCAATAA ATGCCAATAT ATCGTTCGTA 
ACTTCCACAA CATCCGGGAC CCTATATGCC CAGGCGCGCG AAAATTCAAA AAATCCAAAG 
ATAGCAACCT ATACAGTAGA CATTACAGAC GAAGAAGGAA ATGCCATCGC AATATTCCAG 
GGAATGGCAT ACAGGAAAAA AATGAGTGTA GATTCATTTA TGAGCTAA 

 

Protein sequence

MEKIKEFLKM DRFAEHIDIK LLEVSEGYAK AKMDIHEHHL NGVGIVQGGA IFTLADFAFA 
AASNSHGTVA VAINANISFV TSTTSGTLYA QARENSKNPK IATYTVDITD EEGNAIAIFQ 
GMAYRKKMSV DSFMS