Gene Mbur_1478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbur_1478 
Symbol 
ID3998376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcoides burtonii DSM 6242 
KingdomArchaea 
Replicon accessionNC_007955 
Strand
Start bp1553626 
End bp1554597 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content46% 
IMG OID637959235 
Producthypothetical protein 
Protein accessionYP_566135 
Protein GI91773443 
COG category[C] Energy production and conversion 
COG ID[COG2218] Formylmethanofuran dehydrogenase subunit C 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.00968841 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGCTTG AACTGACATC TGTACCGGAC AACGTATGTG ATTATACGTT CAATTTCTAC 
TGGTATGAGA AAGAGCTGGA GCCATCTGCT GTCATACCTG GTCAGAATGG TACGGAATAT
ACCTATCAGC AACTTGTGGA CGAGCTTAAG AAAGGAAATG ATGTTCACAT TAAAGGGAGT
ATTGGAAGTC GTTTTGCCTA TTCTCTGGGA GTTGACCTTG CCCATTTCGG AGGTAGCGCC
AAGACCGAAG CTGCCGGTAA CATCTTCGTT GAAGGAAATG TGGGGCCTGA AGCAGGTATG
GGGATGTCGG CAGGATCGCT TTACATCACA GGTGATATTG AACAGCCGTT TGGCAACATC
ATTGAGGCCG TATCCGATGT TGAGGGATAC AGGAAGTTCA TTTCCATCAC TGAACTTCTG
TGTGGCAATG GAGTTGAAGA GCTTTGCAAG AACGAGTTCG ATGCGGTAAA TGGGAAACTG
ATACTAAATG ATGGTATTCT GCGGGGAACA CTTGCCTCAA GATGTAATTG CGATGCAGAA
GTTATCGTAA AAGGTGATGT TTACAACGGA ACAGGACTTC TTATGGAAAG GGGTAATGTC
AATGTGCAGG GTAATGCCGG GCTTAACACT GGCGCTCATC TGAATGGTGG CTCTGTTGTG
GTAGAAGGTG TGGTGGGGGA ATTCTCCGGT GCTTATATGA AAGCTGGAAC TCTCATTTTC
AATTATGCTA AGGGGTATGT AGGTGCCGGT ATGCTCGGTG GCACGATATA TTCAAAAAAG
AAAGTGACAC CTGCTCCTCC TGCTGATAAA GTGCGAGTGG GTGGTCAGGA TATCTCTATC
GTTCGAAAGT TGACCGGTGC AGGGCGAGTG GAGTCCATGT TGTATAACAA ATATGAGGTC
GGTGAAGAGA AAGAACAATA TGTCAAGGTA AAAATGAGGG ATGGTTCTAT AGTAATGCGT
AAATTGGACT GA
 
Protein sequence
MELELTSVPD NVCDYTFNFY WYEKELEPSA VIPGQNGTEY TYQQLVDELK KGNDVHIKGS 
IGSRFAYSLG VDLAHFGGSA KTEAAGNIFV EGNVGPEAGM GMSAGSLYIT GDIEQPFGNI
IEAVSDVEGY RKFISITELL CGNGVEELCK NEFDAVNGKL ILNDGILRGT LASRCNCDAE
VIVKGDVYNG TGLLMERGNV NVQGNAGLNT GAHLNGGSVV VEGVVGEFSG AYMKAGTLIF
NYAKGYVGAG MLGGTIYSKK KVTPAPPADK VRVGGQDISI VRKLTGAGRV ESMLYNKYEV
GEEKEQYVKV KMRDGSIVMR KLD