Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbur_1467 |
Symbol | |
ID | 3998496 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcoides burtonii DSM 6242 |
Kingdom | Archaea |
Replicon accession | NC_007955 |
Strand | + |
Start bp | 1542479 |
End bp | 1544293 |
Gene Length | 1815 bp |
Protein Length | 604 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637959224 |
Product | excinuclease ABC subunit C |
Protein accession | YP_566124 |
Protein GI | 91773432 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0322] Nuclease subunit of the excinuclease complex |
TIGRFAM ID | [TIGR00194] excinuclease ABC, C subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAGACCGG ATATATCCAA TATCCCTGAG CTGCCAGGCG TCTATCTTAT GAAGGACATC TCTGACAATA TTATTTACAT CGGAAAAGCG AAGTCCCTTA AAAAAAGGGT CAGCCAATAC TTCCAGTCCA GCAAGAACCA TTCTTCCAAA ACAAGAGCAA TGGTCAGGAA GATAGCGGAT GTAGACTATA TTGTCACGGA ATCCGAGGTC GCTGCACTGA TACTTGAAGC AAATCTGGTG AAGAAGAACA GACCGCACTA CAACATCGAC CTGAAAGATG ACAAACGTTA TCCTTACGTG AAGGTCACTG TCAATACTAA ATTTCCGAAG ATATTCATAA CGCGTCGCAG ACTTATGGAT GGAGCTCTCT ATTTTGGCCC CTATACGAAT GTGAAACCTG TCAGGCAAAC CCTTGACATG ATCTCACAGA TATTCAGGAT AAAAAGATGC AACCGTAGAG TAGACGGTAA AGGGAAAAGA GCATGCCTGA ACTATCATAT CGACCGATGC TATGCTCCAT GCAATGGCTC GATCACTCCT GAAGAATATC GCAATAATGT GATGGAAGCA GTGAAGTTGT TTAAAGGCGA AACATCCGGT ACAATAAAAG AGCTTCAGGA AAAGATGAAC ATCCATGCTA TTGCACAGGA ATATGAGAGT GCTGCTGTGA TACGTGACCA GATAGATGCT CTGAAAAGCC TTTCCCGGCA ACAGACGGCC ACTGCGGGAA ATGATGACAG CGACATAATT GCAACTGCCT CTGACGATGA GACCGTTTTC GTACAGATCT TCTACATCAG GGATGGCAAC ATGGTAGGTA AAGCCGATAT GTCCCTTTCG TGGGGAGATG CCACCGGCAA TATAGCCCGT GTCACAGAGG AGTTCATAAA GCAATACTAT CAGGATGCAC CTGTACCTCC AGAAATACTT GTACAGTACC CGATACCTGA AAAAGAACTC GTTATCAAAT GGCTTTCTGA AAAAGCCGCG AGAAGTGTGC AGATACAGGT ACCTCAAAGA GGTAACAAGA AAAGATTAAT GGAAATGGCC GAGCAAAATG CCCAAATGAC CCTGGAGCAA TCACACCTCA AACAAAGTGA TAAGGAACAG GCGCTACAAG CATTGTTACA GCTAAGAGAT GCACTTGCAT TGTCCACATT GCCTGCACAC ATCGAAGGTT TTGATATTTC CAACATATCA GGCACTGATG CTGTTGGTTC AATGGTGGTC TTTGAGAACG GCCTACCTGC AAATAGCAAA TACAGGCATT TCAACATAAA AACGGTAAAG GGAATAGACG ATTTTGCCAT GATGGCAGAA GTAGTAAAGC GCAGATATAC CCACCAGAAA GCCGAGAAAG ACAAACTACC AGATCTCATC CTCATAGACG GAGGTCCCGG ACAGGTCAGT GCTGCCATGG GCTCTTTAAA GGAACTGCAA CTGGACATCC CGCTTGTGGG ACTTGCAAAA CGATTCGAGC ATATCATCGT ACCAAAGGAT GGCACCGATG AGGTTGTAAT ATTACCCCAC ACATCCGAAG CCCTCAAAGT GCTCATGCGC GTAAGGGATG AGAGCCACAG GTTCGCTGTA TCATCCCACA GAAGAAGACG CACTGCAAGG CTCTCCCACT CAGAACTGGA CACTATCCCG GGGATAGGAG CCTCAAGAAA AAAGGCATTG TTGAACCATT TCAGTTCTAT TGAGCAGATA CGTCATGCAT CCGTCGAAGA GCTTACTGCA GTGGAGGGTA TCAGTAAAGG ACTTGCTGAA AGGATCGTTG CTCATTTTAA TAAAGAGAGA GTTGAAAACC AGTAA
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Protein sequence | MRPDISNIPE LPGVYLMKDI SDNIIYIGKA KSLKKRVSQY FQSSKNHSSK TRAMVRKIAD VDYIVTESEV AALILEANLV KKNRPHYNID LKDDKRYPYV KVTVNTKFPK IFITRRRLMD GALYFGPYTN VKPVRQTLDM ISQIFRIKRC NRRVDGKGKR ACLNYHIDRC YAPCNGSITP EEYRNNVMEA VKLFKGETSG TIKELQEKMN IHAIAQEYES AAVIRDQIDA LKSLSRQQTA TAGNDDSDII ATASDDETVF VQIFYIRDGN MVGKADMSLS WGDATGNIAR VTEEFIKQYY QDAPVPPEIL VQYPIPEKEL VIKWLSEKAA RSVQIQVPQR GNKKRLMEMA EQNAQMTLEQ SHLKQSDKEQ ALQALLQLRD ALALSTLPAH IEGFDISNIS GTDAVGSMVV FENGLPANSK YRHFNIKTVK GIDDFAMMAE VVKRRYTHQK AEKDKLPDLI LIDGGPGQVS AAMGSLKELQ LDIPLVGLAK RFEHIIVPKD GTDEVVILPH TSEALKVLMR VRDESHRFAV SSHRRRRTAR LSHSELDTIP GIGASRKKAL LNHFSSIEQI RHASVEELTA VEGISKGLAE RIVAHFNKER VENQ
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