Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbur_1178 |
Symbol | |
ID | 3998333 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcoides burtonii DSM 6242 |
Kingdom | Archaea |
Replicon accession | NC_007955 |
Strand | - |
Start bp | 1267426 |
End bp | 1269240 |
Gene Length | 1815 bp |
Protein Length | 604 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637958944 |
Product | DNA-directed RNA polymerase subunit B' |
Protein accession | YP_565851 |
Protein GI | 91773159 |
COG category | [K] Transcription |
COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
TIGRFAM ID | [TIGR03670] DNA-directed RNA polymerase subunit B |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000000367699 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGTTGAAG CAAAAGTCTT CCTCGATGGG GAACTTATCG GAACTCACAA TGATCCGGTA GAGCTTGTCG AGAGTATTAG GGGGCAGCGC CGTAGTGGCA TGTTGCCTCA CCAGTTGAAT GTAACGCTTT ATGAGGATAT TCATGAAGTG ATCCTCAGTT CTGATATAGG TCGTGCAAGA AGGCCTGCAA TAGTTGTTGA AAATGGTGTC CCGTCGATCA CGGCAGAGTA TGTCGAGAAA GTCCGGGATG GTGAGATCTC GTTCCGCGAT CTTCTGGACA TGGGATATGT TGAATATCTG GATGCTGAGG AGGAAGAGAA TGCATTCATT GGTCTTTATG AAGAAGACCT TACTCCTAAC CACACTCATC TAGAGATCGA TCCTTCCTTG ATGCTTGGTA TCTGTACCGG TATGGTTCCA TATCCTGAGC ACAATGCTTC TCCGAGGAAC ACGATGGGTG CAGCTATGAT CAAGCAGTGT ATAGGAGTTT CTTCATCCAA CCTGAAACTT AGGCCTGATA CACGTGCGCA TGTGCTTCAC TATCCGCAGA AGGCAATGAC ACGCACTCAG ACCTGTGATG CTATCCATTT CGATGAGCGT CCTGCTGGGC AGAACTTCGT TGTCGCTGTC ATGTCCTACG AAGGGCATAA CATTGAGGAT GCACTGGTTT TCAATAAAGG TTCCATTCAG AGAGGACTTG GAAGAAGCCA CTTCCTGAGG ACCTTCGAAG GTGAAGAACG CCGTTATCCT GGTGGACAGG AAGACAAGTT CGAGATCCCT GATTCTGAGT TCAGAGGTGC CCGTAGTGCA GATGCATATG CAAACCTCGA CATTGACGGT CTTGTAAATC CTGAGACTGT TGTAGGTCCA AATGATGTGC TTATTGGTAA GACAAGTCCT CCAAGGTTCC TTGAAGAACA GTCTGACTTT GGTATAACCA TTGAACAGCG CAGAGAAAGT GCAATTACGA TGCGCTCGAA CGAGAAAGGT ATTGTTGATA CTGTTATTCT TACTGAATCT ATCAATGGTA CAAGGCTCGC AAAGGTGAAA ATCAGGGATG AAAGGATCCC TGAGATCGGT GACAAGTTCG CATCAAGACA CGGTCAGAAG GGTGTTATCG GATTGATAGT TCCGTATCAT GATATGCCAT TTACGGAACT GGGTATGGTT CCTGATCTTG TTATTAATCC TCATGCTATC CCTTCACGTA TGACCGTTGC TCACGTTCTG GAAATGATCG GTGGGAAACT CGGTTCTCTT GAAGGTCAGC GTAAGTGGGG CACTGCATTC TCCGGTGATA TGGAGGATGG TATTCGCGAT GGGCTTAAGA ATCGTGGTTT CTCACATACA GGGAAAGAGG TGTTCTGTGA TGGTGTTACT GGTAAGAAGA TCCAGGCGGA TGTTTTTGTT GGTGTTATCC TTTACCAGAA ACTCCACCAC ATGGTCGCAT CAAAGATCCA TGCAAGGTCC AGAGGCCCTG TGCAGGTATT GACCCGTCAG CCAACCGAGG GTCGTGCTCG CGAAGGTGGT CTTAGGTTTG GTGAGATGGA AAGGGATGTA CTGATCGGGC ACGGTGCTGC GATGACCTTG AAGGAAAGGC TTCTCGATGA GTCTGACAAG GTCGTAGAAC TTGTATGCGC TCAATGTGGT ATGGTGGCAA CTTTTGACAG GACTCGTAAT ATCAGATACT GTTCGAACTG TGGTGCTGAA ACGGATATTC ACCCGGTGGA AATGAGTTAT GCTTTCAAGT TGCTTCTTGA TGAGATCAAA TCCCTTGGGG TTGCTCCAAG ACTTAGACTT GATGATGCGG TGTGA
|
Protein sequence | MVEAKVFLDG ELIGTHNDPV ELVESIRGQR RSGMLPHQLN VTLYEDIHEV ILSSDIGRAR RPAIVVENGV PSITAEYVEK VRDGEISFRD LLDMGYVEYL DAEEEENAFI GLYEEDLTPN HTHLEIDPSL MLGICTGMVP YPEHNASPRN TMGAAMIKQC IGVSSSNLKL RPDTRAHVLH YPQKAMTRTQ TCDAIHFDER PAGQNFVVAV MSYEGHNIED ALVFNKGSIQ RGLGRSHFLR TFEGEERRYP GGQEDKFEIP DSEFRGARSA DAYANLDIDG LVNPETVVGP NDVLIGKTSP PRFLEEQSDF GITIEQRRES AITMRSNEKG IVDTVILTES INGTRLAKVK IRDERIPEIG DKFASRHGQK GVIGLIVPYH DMPFTELGMV PDLVINPHAI PSRMTVAHVL EMIGGKLGSL EGQRKWGTAF SGDMEDGIRD GLKNRGFSHT GKEVFCDGVT GKKIQADVFV GVILYQKLHH MVASKIHARS RGPVQVLTRQ PTEGRAREGG LRFGEMERDV LIGHGAAMTL KERLLDESDK VVELVCAQCG MVATFDRTRN IRYCSNCGAE TDIHPVEMSY AFKLLLDEIK SLGVAPRLRL DDAV
|
| |