Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbur_1106 |
Symbol | hemD |
ID | 3997713 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcoides burtonii DSM 6242 |
Kingdom | Archaea |
Replicon accession | NC_007955 |
Strand | + |
Start bp | 1187209 |
End bp | 1188009 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637958876 |
Product | uroporphyrinogen-III synthase |
Protein accession | YP_565784 |
Protein GI | 91773092 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1587] Uroporphyrinogen-III synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0000478387 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATCAAA ACGGAAAGAA GCCTGTAATA GCTATAATGA GGCCTGAGAG TTATGTGGTA AAGTCACGTG AACTTGCAGA ATCATTTGGT TTTGAAGTTG TGGCTATCCC AATGATAGAA ATTGAAGGTA TGAAGGATGA ATATTTCGAT GCATTTGCAG AGAACATATT CTCTGGAATA TCCGATTATG TTATATTCAC CAGTGCCAAT GGAATCGACC ATACTCTTTC CAAGATAACC CCGGACAGGC ACAGCAAGTT CATCGATGCT CTTAACAATA CAAATGTGGT AGCTATCGGT CCGACTACAC GCAAGCAGCT TGAAGGTATT GGAATTGGTG TAATGGGTAT GCCTGGCGTT TACAGTTCAG AAGGGCTGGT GGAATATCTC TGTCCCGATG TAAAAGGTAA ACAGATAGAT ACTGCAAGGA GTGCTTACGG TTCTTCTCTT CTTATCTCAG GTTTAAGGGA TTGTGGTGCT AACGTGCTTG AGACCAAGGT CTACACTCTG ACACTGCCAA AAGGGCCATT GCAGGATGAG CTTATTACTA AAAGTGTCAA CGGCGAGATA GATGTATTTG CATTTACCAG TTCCATGATG GTCAGGAGCT TTTTCGACCG TGCTGAGGCT CTTTGTGAAG GCAAATCAAT ACGGGAAGTA CTTGAGAATT CCCTTGTGGC TGCCATCGGA ATCCCAACTG CCAATACATT GAAGGAATAT GGTGTGGAAG TGAATGTTAC TCCTGATGAG TACACATTCA AAGAGATACT GAGGGTCGCA AAAGCGGCTC TTGAAAACTG A
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Protein sequence | MDQNGKKPVI AIMRPESYVV KSRELAESFG FEVVAIPMIE IEGMKDEYFD AFAENIFSGI SDYVIFTSAN GIDHTLSKIT PDRHSKFIDA LNNTNVVAIG PTTRKQLEGI GIGVMGMPGV YSSEGLVEYL CPDVKGKQID TARSAYGSSL LISGLRDCGA NVLETKVYTL TLPKGPLQDE LITKSVNGEI DVFAFTSSMM VRSFFDRAEA LCEGKSIREV LENSLVAAIG IPTANTLKEY GVEVNVTPDE YTFKEILRVA KAALEN
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