Gene Mbur_0486 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbur_0486 
Symbol 
ID3998324 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcoides burtonii DSM 6242 
KingdomArchaea 
Replicon accessionNC_007955 
Strand
Start bp481101 
End bp481712 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content44% 
IMG OID637958299 
ProductABC proline/glycine betaine transporter, inner membrane subunit 
Protein accessionYP_565219 
Protein GI91772527 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1174] ABC-type proline/glycine betaine transport systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.00597716 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTAACTC TTGAGACGAT ACTCAGCCAT ACTGCTGACC ACCTGGTATT GGTGGTTCTG 
ACACTGATCA TAAGCATTTG CATATCCATG CCTCTTGCAT TTGGTTCTCT TTACAACAAG
CGCTTTGGTT ATGTGGTGAT CAAGTTTGCA AATCTTGCAC AAGCGGTCCC AAGTTTTGCA
GTTGTTGCTA TCGTTGTCCC TCTTATGGGA ATTGGTTTCT ATCCTGCAGT GGTGGCAATA
TTGCTTCGTG CTTTGCTTCC GATAATCAAG AACACGTATA TTGGGCTTTC AACGGTCGAT
CCGTCAATGC TTGATTATGC GGACGGTATC GGGCTGAACG AGTGGCAGAT ACTTCGCTAT
GTTAGGTTGC CAAATGCTTA TCCCGCTATT TTTGCAGGCA TTAAGTTCGC TTTCATACTC
ATCAACAGCA TTGCTATTCT CACGGCGTAT ATTGGAAGTG GTGGCCTTGG AGAGCTGATA
TTCCAGGGAC TTGTTGCATT CAATAATGAG AAGATCCTCG CAGGTGCTAT TCCAGCCATT
CTGATAGCGA TAGCATTTGA TATTATATTT ACCAGGATCG AAAAGAAGCT CACACCGCAA
TACAGGAAAT AA
 
Protein sequence
MVTLETILSH TADHLVLVVL TLIISICISM PLAFGSLYNK RFGYVVIKFA NLAQAVPSFA 
VVAIVVPLMG IGFYPAVVAI LLRALLPIIK NTYIGLSTVD PSMLDYADGI GLNEWQILRY
VRLPNAYPAI FAGIKFAFIL INSIAILTAY IGSGGLGELI FQGLVAFNNE KILAGAIPAI
LIAIAFDIIF TRIEKKLTPQ YRK