| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbur_0225 |
|---|
| Symbol | |
|---|
| ID | 3997661 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcoides burtonii DSM 6242 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007955 |
|---|
| Strand | + |
|---|
| Start bp | 202102 |
|---|
| End bp | 203346 |
|---|
| Gene Length | 1245 bp |
|---|
| Protein Length | 414 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637958062 |
|---|
| Product | TPR repeat-containing protein |
|---|
| Protein accession | YP_564985 |
|---|
| Protein GI | 91772293 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3063] Tfp pilus assembly protein PilF |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTGATG AAGGCGATCA TGCAGGGGCA TTGAATGCTT TTGAAACTGC TATTATGTAC
CAGCCAAACG TTCCAGCTGC CTGGTATGGT AAAGGTGATT CTCATTTTTA TCTTGGTGAT
TATGAAGCCG CTATTCAGGC GTATGATATG GCGCTACAGT ACGATCCGAA TCTTTTGAAT
GCATATGCAG GCAAAGCTGA TTCATTAGCA AAGATCGGGA AGTCCGATGA AGCCAGGACT
CTTTATGAAA AAGCAACTGC TATCGGGGCT GATGATGCAG AAATATGGTC TCGTAAAGGC
AGTACTTTGT ATGGATTGGG ATATTATTCT GAATCGGTTA ATGCCTATGA TAAGGCCATT
TCCCTGGATC CAACTAACAT ATTATCGTAT GTTGGCAAAG GCTATTCACT AATTGGAATT
GCACAGTATT CCGATGCATT GGAGGCATTT GAAGAGGCTC TCGTATTTGA CAACGGGTAT
TCTATATCAT GGGTTGGAAA AGGTGATTGC TATTATGGTC TTGGTGGCTA TGAAGCTGCA
ATAAGTGCTT ATGATATGGC ATTATCAATA GATCCTACCT TTTCACCAGC ATGGTCCGGT
AAAGGCTATT CTCTATATGA AATAGGTGAT CATGAGGGTG CAATTGTTGC ATTCGATACT
GCTCTATTTC ACTCTCCTAA ATATGTAAAG GCATTAAGTG GAAAAGCTTT CACGCTTTTT
GCACTCGAGG AATACGATCT ATCTCTTATT GCTTTCAATG AAACGATCGA TGCTGATGCT
AGTTATGCAA AGGCATGGTC TGGTAAAGGT GATGTCCTTT CACAGATCGG GAAGGCAGAA
CAGGCAACTG CTTCATACAG AATGTCCGTC CAACTTTACT CCGGGGATGC TGATGCTCTC
TACAATCTTG GGCGTGAGCT TTTTGAAATG GGACTTTTTA GTGAAGCCCT TGAAGCGTTC
GAAGCTTCGT TGAACGTAAA CTCTGAGAAC TTATTTGCTC TTGTAGGTAA AGGTTATGCC
TTATATGAAT TAGGTGATTA TAAGGGTGCA TCTGTGGCCT TTGATCAAGC AATTGCTGTC
CAGCCAGGGT ATGAACGGTC CATTGAAGGT AAACAACTAG CTGAGACCCA ACTCAGGATG
GAATGGGTTC GGAGTTTGTT CTCAATCGAA ATAACAATGG CAGCATTGTT CATTCTTGCT
GTCTATTTCC TTTACAAGAA AAAGAAGTCT GATCTGATCA AATGA
|
|---|
| Protein sequence | MLDEGDHAGA LNAFETAIMY QPNVPAAWYG KGDSHFYLGD YEAAIQAYDM ALQYDPNLLN
AYAGKADSLA KIGKSDEART LYEKATAIGA DDAEIWSRKG STLYGLGYYS ESVNAYDKAI
SLDPTNILSY VGKGYSLIGI AQYSDALEAF EEALVFDNGY SISWVGKGDC YYGLGGYEAA
ISAYDMALSI DPTFSPAWSG KGYSLYEIGD HEGAIVAFDT ALFHSPKYVK ALSGKAFTLF
ALEEYDLSLI AFNETIDADA SYAKAWSGKG DVLSQIGKAE QATASYRMSV QLYSGDADAL
YNLGRELFEM GLFSEALEAF EASLNVNSEN LFALVGKGYA LYELGDYKGA SVAFDQAIAV
QPGYERSIEG KQLAETQLRM EWVRSLFSIE ITMAALFILA VYFLYKKKKS DLIK
|
|---|
| |