Gene Mbur_0189 details

Gene Information

• Locus tag: Mbur_0189
• ID: 3997156
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanococcoides burtonii DSM 6242
• Kingdom: Archaea
• Replicon accession: NC_007955
• Strand: +
• Start bp: 172508
• End bp: 173173
• Gene Length: 666 bp
• Protein Length: 221 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 637958026
• Product: ZPR1-like zinc finger protein
• Protein accession: YP_564949
• Protein GI: 91772257
• COG category: [R] General function prediction only
• COG ID: [COG1779] C4-type Zn-finger protein
• TIGRFAM ID: [TIGR00310] ZPR1 zinc finger domain; [TIGR00340] ZPR1-related zinc finger protein

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 0.0833156
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAGCGCAG AGGATAGTTC CGGGGCAGAG TCCCCGAGAT CATTTGAGAC CAGAACTTCC 
TGTCCTCTCT GCCAGGAAGA TCTTATCATT AAGTGGCAGG GGGATGAAAT TCCCTATTTC 
GGGGAAGTTA TGTACATTTC CACTTCCTGT TGTAACTGTG GTTTCAGGTT CACGGATACA 
ATGATACTTG CTCAGAAAGA GCCTATGCGT TTTGAGCTCA AGGTGGAAGG ACTTGAGGAT 
CTCAATGCAA GGGTCATACG TTCGACCTCA GGCACCATAA GGATCCCTGA ACTCGGAATC 
GATGTTGAGC CCGGTTCTGT TTCGGATTCA TATGTTACTA ATATTGAGGG CATTCTTCAA 
AGGGTACAGT CGGTTGTCGT GACCGCTACT GGCTGGGTTA AAGATGATGA CGATGCTTAT 
GCACGTGGAC TGGAACTACA GGATCAGATT GAAAAAGCTA TAGCTGGGGA TTTTCCTCTG 
ACTGTCATTA TAGAAGATCC TCTTGGTAAC AGTGCTATAA TCTCTGAGAA AGTTGTATCC 
AGAAAGCTCT CGGCCGAGGA AGCGGGCGAT CTTCATAGCG GTATGGTTGT CTTTGATGTT 
GATACCTCTC AGATGGAAGT CGATTCTTCT GATAAGATAC AGCCGATTGG AAATAGCTAT 
AAATGA 

 

Protein sequence

MSAEDSSGAE SPRSFETRTS CPLCQEDLII KWQGDEIPYF GEVMYISTSC CNCGFRFTDT 
MILAQKEPMR FELKVEGLED LNARVIRSTS GTIRIPELGI DVEPGSVSDS YVTNIEGILQ 
RVQSVVVTAT GWVKDDDDAY ARGLELQDQI EKAIAGDFPL TVIIEDPLGN SAIISEKVVS 
RKLSAEEAGD LHSGMVVFDV DTSQMEVDSS DKIQPIGNSY K