Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbur_0021 |
Symbol | rps5p |
ID | 3996921 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcoides burtonii DSM 6242 |
Kingdom | Archaea |
Replicon accession | NC_007955 |
Strand | + |
Start bp | 10384 |
End bp | 11019 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637957863 |
Product | 30S ribosomal protein S5P |
Protein accession | YP_564795 |
Protein GI | 91772103 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0098] Ribosomal protein S5 |
TIGRFAM ID | [TIGR01020] ribosomal protein S5(archaeal type)/S2(eukaryote cytosolic type) |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00000032462 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCATATG AATATAATGA AGAATGGGTT CCACAGACAA GGCTCGGAAA GCTTGTCTTT GATGGACAGG TCACATCCAT GGATGAAGCT ATGGATTCCG GTCTGCCTAT AAGGGAATCA AAAATAGTAG ATCTATTATT ACCTGAACTT GAAGACGAAG TTCTCGACAT TAACATGGTT CAGAGAATGA CTGACTCCGG AAGGCGTGTC AAGTTCAGGG CTACTGTTAT CGTTGGAAAC GGAGACGGTT TCGTAGGACT TGGTCAGGCA AAAGATGTAC AGGTAGGACC TGCTATCAGA AAAGCTATTG ACAATGCAAA GATCAACATC ACACGTATCA AACGTGGATG CGGATCATGG GAATGTGGGT GTGGACTTCC ACACACCGTT CCTTCAGAGG TCAATGGTAA AGCAGGTAGT GTAACTGTGG TTCTCAAGCC TGCTCCTCGT GGGCTTGGTC TTGCTGCAGG AGGCACTGCA AGAAAGGTGC TTGAAAAAGC AGGCGTCAAA GATGTCTGGA CACGTACCGA AGGTCAGACC AGGACAACCC TCAACTTCGC AAAGGCAACA TACAATGCTT TGATGAACAC AGGCACTGTA AGGCGTCCAA TCGTTTTCGA TGAGACGGAG GCCTAA
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Protein sequence | MAYEYNEEWV PQTRLGKLVF DGQVTSMDEA MDSGLPIRES KIVDLLLPEL EDEVLDINMV QRMTDSGRRV KFRATVIVGN GDGFVGLGQA KDVQVGPAIR KAIDNAKINI TRIKRGCGSW ECGCGLPHTV PSEVNGKAGS VTVVLKPAPR GLGLAAGGTA RKVLEKAGVK DVWTRTEGQT RTTLNFAKAT YNALMNTGTV RRPIVFDETE A
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