Gene Mboo_2449 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_2449 
Symbol 
ID5412009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp2530035 
End bp2531219 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content48% 
IMG OID640869706 
Producthypothetical protein 
Protein accessionYP_001405606 
Protein GI154151988 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTTTTCA CCACCTCTGT TTTCCATTCG TTTATCGATT ATTTCGATTT CCAGTACTAT 
CTGCAGGCAG CAGTCAATGT GATGCAGGGT CAGGTACCGT ATGCGGATTT TGGTTTCGAT
TACCCTCCCT TTGCCTTAAT CCCTATATTC CTTGCCTTTA TCCCGGGGAT CCTGTTTGAC
AGTGCCGGGA TTTTTGTACT CTCGTTCCAG TTCCTGATGG TGATCTGCGA CATCGTCATT
GTGGTGTGTA TCTATCTGAT TGGCCTGAAA CTCTATGACG AAAAGACCGC CTTCATCGCT
GCCTTTCTCT ATGCAACAGC ATTTTCAGTT GGTTATTTTG TCCTGACCAA ATACGATGCA
TTCCCCACCT GCCTCCTGAT GCTCGCGGTA CTCTTTACGG TCTATAACAG AAGTATCCGG
GGATATATCG CCCTTGTTTT CGGTTTCCTG GCCAAAATTT TCCCGGGCAT AGCCCTTCCG
TTTGTAGCAC TCTATAATGC CAAATCGACC TCGCTCCGGC AGGAAGTGAT TAATCTCCTT
AAGGTTAGCA TACCGGTCGC GGTCATCTTC GTTGTTCCGA TTCTAATCCT GAAACCCGGT
ATTATCCTTT CATATATCTC AGGCAGTATC ATCAGGTCGG CGATTTATGT CAATACTGCA
ACCTATACGG TATATGCATA CCTCAATACG GTCCTGAATC TTGGGATCTC CATATCGGAA
GTCTCGCTCC TGATGTATGG CCTTATGGGG CTGCTCCTGC TTTTCCTGTT TGCTATTGCA
TATGTTGAGC CGCACAAGGA CGCCCGTTTC CTGATAAAAC TTCTTGCCGT CTCGATCTTC
GCAGTTGTGT TCTGCATGGC ATACCACAGC CCGCAATATG TTGTGTGGTA CACGCCCTTT
GTCTGTCTCC TTGTGGCAGA TTCCCTCCCG GGGATCCTCC TTTTTTATGC TACACAGGCA
ATCACATATA TTGAATTCCC GCTGTCGTTT GGCACACTGT ACACCAACAC GGCATATTCC
GGCGCCCCGG GAACATCGGG CTGGTATTGT GCCCTAGCGT TGTTTACGAT CGATATCGTA
ACCTATCTCC TTCTCATGTA CGTGGCAGTA CGGCCGACCG GGGCCCATCT CCGTATGCTT
CTCGATCGCA TACCGGGGAG ACAACAGCAG AAAAAAACGG AATAA
 
Protein sequence
MFFTTSVFHS FIDYFDFQYY LQAAVNVMQG QVPYADFGFD YPPFALIPIF LAFIPGILFD 
SAGIFVLSFQ FLMVICDIVI VVCIYLIGLK LYDEKTAFIA AFLYATAFSV GYFVLTKYDA
FPTCLLMLAV LFTVYNRSIR GYIALVFGFL AKIFPGIALP FVALYNAKST SLRQEVINLL
KVSIPVAVIF VVPILILKPG IILSYISGSI IRSAIYVNTA TYTVYAYLNT VLNLGISISE
VSLLMYGLMG LLLLFLFAIA YVEPHKDARF LIKLLAVSIF AVVFCMAYHS PQYVVWYTPF
VCLLVADSLP GILLFYATQA ITYIEFPLSF GTLYTNTAYS GAPGTSGWYC ALALFTIDIV
TYLLLMYVAV RPTGAHLRML LDRIPGRQQQ KKTE