Gene Mboo_2415 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_2415 
Symbol 
ID5410491 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp2483673 
End bp2484485 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content58% 
IMG OID640869672 
Productexodeoxyribonuclease III Xth 
Protein accessionYP_001405572 
Protein GI154151954 
COG category[L] Replication, recombination and repair 
COG ID[COG0708] Exonuclease III 
TIGRFAM ID[TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGACCA TCCTTTCCTG GAACGTGAAC GGCCTTCGCG GGTGCTATGA CCGCAAGCAG 
TTCCTGCCGG TCTTCCGGCA CAACCCGGAG ATCGTCTGCG TCCAGGAGAC CAAAGCCCCG
GGGGAGAAAC TCCCCGAACG AGTACGGAAC CTGTACGGCT ACCACACGTT TTTTTCTGCG
GTTCCGGCGG GAAGCACGGC AGGGGTAGGG CTCTTTACCC GGCATGAACC CCTCTCGGTA
CAGTATGGCT TTGGCGATCC GGACTTTGAT AATAAGGGCC GGGTCCTTAT GGCGGATTAC
GGGAGATTCG TGCTGCTCAA CATTGCCTTT CCCCTCGGGA TAAAACCGAT GGGAAACCTG
GACAACAAAC TGAGGTTCTA CGATGCATTT CTCTTGTACA TCCGTTCTCT CTGTGAACAG
GGCCGGGCCG TGATCGTCTG CGGCGATTTC AACGTGGCGC ACACCGACAA GGATCTCTAT
AATCCGCCAA AAAAACCGGT CCGCCAAGTG GGCATATCCC CGGATGAGCG TGGCAGGATC
GACCAGCTGA TCGCACTCGG GTTCACCGAC ACGTTCCGGC TCTTCCATGC GGGCCCCGGC
TACTATACGC GCTGGCCGTT CCAGAACAAT TCGAGGGAGC GCAACTTCGG CTGGCGGATC
GATTACTGTT TCGTGAGCCA GGCATTGCGG CCGTTTGTGG CCGATGCCAC GATCCTGCAC
GAGATCAAAG GATCGGATCA CTGCCCGGTT GCACTGGAGC TCAACCTGCC GGAAACGGAT
ATGATCCTTC CCGCCCCAAA AGCGGTATCA TGA
 
Protein sequence
MPTILSWNVN GLRGCYDRKQ FLPVFRHNPE IVCVQETKAP GEKLPERVRN LYGYHTFFSA 
VPAGSTAGVG LFTRHEPLSV QYGFGDPDFD NKGRVLMADY GRFVLLNIAF PLGIKPMGNL
DNKLRFYDAF LLYIRSLCEQ GRAVIVCGDF NVAHTDKDLY NPPKKPVRQV GISPDERGRI
DQLIALGFTD TFRLFHAGPG YYTRWPFQNN SRERNFGWRI DYCFVSQALR PFVADATILH
EIKGSDHCPV ALELNLPETD MILPAPKAVS