| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_2197 |
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| Symbol | |
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| ID | 5410983 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | - |
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| Start bp | 2271833 |
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| End bp | 2273623 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640869447 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001405354 |
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| Protein GI | 154151736 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGATACAG CAGCGCCCTC CCCGTCAGGA TCGCCCCTTC CGGCCGGTGA ACCGGGTGCA
GTTGCCCGGG ACCCGAATTA CAAGTGGATT GCACTCTCGA ATACAACGAT CGCCATGTTC
ATGGCCGCGG TGAACGGGAG CATCATCCTG ATCTCCCTGC CTGCTATTTT TAACGGAATC
AATATCAACC CGCTCACTTC CTTCCAGTAC CTGCTCTGGA TCCTGATGGG CTACGGGATT
GTCACCGCTA CCCTCCTTCT CAGTTTCGGG CGGCTTTCGG ATATGTACGG GAGGGTGAGA
CTCTACAATA TCGGGTTTGC CATTTTTACG GTAGGTTCTA TCCTACTCTT CCTGACCCCG
GATACCGGCG ATGCCGGGGC TATTGAACTC ATCGTCTTCC GTGTCGTCCA GGCCGTGGGT
GCGGCGTTTA TCTTCTCCAA CAGCGCGGCG ATCCTCACGG ATGCCTTCCC TCCCGATGAG
CGGGGAAAGG CGCTGGGCCT CAACCAGGTG GCGGCACTCT CGGGGCAGTT TGTCGGACTT
CTGATCGGCG GCATCCTTGC GGTTTTCCAT TGGCGGTATG TCTTTTTGAT CAGTGTGCCG
TTCGGTGTCG TCGGCACGAT CTGGGCATTC CTCAAGCTCA AGGAGCCGGC CTATGGGAAA
CGCTCCCAGA AGATCGATAT CTGGGGGAAT CTTTCCTTTA TCGGAGGCCT GACGATCTTT
TTGGTCGGTA TCACCTATGC CCTTCTCCCG TATGGCAGCG ATTCCATGGG CTGGAGAGAT
CCGTGGGTTG TCGCTGCACT CCTGTGCGGC GTCCTGCTGC TCTTTGCATT TCCCATCATC
GAGACCCGGG TCGAAGACCC GATGTTCCGG ATGGACCTTT TCCGGATCCG CAACTTTGCA
TTCGGGAATG CCGCCGGATT TATGTCAGCC CTTGCCCGCG GCGGGGTCAT GATTATCCTC
ATCATCCTGC TCCAGGGGAT CTGGCTGCCC CTGCACGGGT ACAGTTTTGA GTCCACGCCG
TTCTGGGCCG GGGTCTATAT GCTGCCGCTC ACTATCGGGT TTGTTATTAT GGGCCCGCTC
TCCGGCAGCC TCTCCGACAA ATACGGGGCC CGGTGGCTCA GCACGCTGGG CATGGTACTG
GTCGGGATCT CGTTTTTGAT TCTTGCGATC CTGCCGTACA ACTTCGATTA CCTGCCCTTT
GCCATCGCTC TCATGATTAT GGGGATAGGA AACGGCATGT TTTCCTCGCC CAATGCCGCA
GCGATTATGA ATTCCGTACC CCCTGATGAG CGCGGGGTTA CTTCCGGGAT GATGTCAACG
CTGATGAACT CGGGCTTTGT CCTCTCTATG GGGATGTTTT TTACCATCAT TGTGGTGGGA
CTTACGGGTG CGTTCCCAAC GGCACTCGCG GGAGCCCTCA CTGCGGCCAA TGCAAGCCCG
CTCATCCCTT CAATGAGCGC CATTCCCCCG ACCGGTGCAC TATTTGCCGC ATTCCTCGGG
TACAACCCGG TCCAGATGAT CCTTGGCGGC CTGTCTCCGG CCCTGATTGC GACAATTGCC
CCGGCAACCC TTGCCACCCT TACCGGGGCA GTCTGGTTCC CGACAACGCT TGCCGGGGCT
TTTATGCCCT CCCTGGCGCT TTCGTTCTAT ATCGGGGCTG GCATATCCTT TGTGGCAGCT
CTGCTCTGCG CGATGAGGGG GGAAAAATAT ATTGACGAGT CGGATGGTGC AGTCCCGATC
AATGCTTCTG ATACCGATCC GCAAGAGGTA TCAGGGGATA ATGTACAGTA G
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| Protein sequence | MDTAAPSPSG SPLPAGEPGA VARDPNYKWI ALSNTTIAMF MAAVNGSIIL ISLPAIFNGI
NINPLTSFQY LLWILMGYGI VTATLLLSFG RLSDMYGRVR LYNIGFAIFT VGSILLFLTP
DTGDAGAIEL IVFRVVQAVG AAFIFSNSAA ILTDAFPPDE RGKALGLNQV AALSGQFVGL
LIGGILAVFH WRYVFLISVP FGVVGTIWAF LKLKEPAYGK RSQKIDIWGN LSFIGGLTIF
LVGITYALLP YGSDSMGWRD PWVVAALLCG VLLLFAFPII ETRVEDPMFR MDLFRIRNFA
FGNAAGFMSA LARGGVMIIL IILLQGIWLP LHGYSFESTP FWAGVYMLPL TIGFVIMGPL
SGSLSDKYGA RWLSTLGMVL VGISFLILAI LPYNFDYLPF AIALMIMGIG NGMFSSPNAA
AIMNSVPPDE RGVTSGMMST LMNSGFVLSM GMFFTIIVVG LTGAFPTALA GALTAANASP
LIPSMSAIPP TGALFAAFLG YNPVQMILGG LSPALIATIA PATLATLTGA VWFPTTLAGA
FMPSLALSFY IGAGISFVAA LLCAMRGEKY IDESDGAVPI NASDTDPQEV SGDNVQ
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