Gene Mboo_2157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_2157 
Symbol 
ID5410133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp2228968 
End bp2230110 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content58% 
IMG OID640869402 
Producthypothetical protein 
Protein accessionYP_001405314 
Protein GI154151696 
COG category[S] Function unknown 
COG ID[COG1602] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.300379 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGTGCA TCTCATGCAA GGGAAAGGGA TTGTGCGGCC TGCCTCGGTG CCCGATTACG 
AGCCGGTTTC TCGCCCAGAC AGACGTGAAA ATATCCGCAA GTTACCAGGG AAGCGCGCCC
TCGGTCTTTG TCGGGAGCTT CGGGTACCCG GATATCCGGA GAGGCCCCCT CCTTATTGAC
GACAGCGATC ATCCTCCGGA CTGGTTAACC CGGGGTCTTG GGATTGAAGA TATCGTGAGC
CTCCGTGCCC GGACGATCTG CGGGCGATCT CCGGCCCGTC ATGTTGAAGG AGGACTGCAG
GAGATCGCCC GTTCGTCACT CCCGCTGGAA GTGGATGTTG CCTTCTCCCG CCCGGTCTCT
TTTGCAATGA CCTTTGACGG GACTGTGGCC CCGATGGGTT TTTCCGGGGA GATCCGGCGG
CTGGATGTAG TTGGAAGTGC AAAGGTGGAA CGGATTGTGG ACCGGATCAC CGGGGATACC
GATCTCGGGG CTGGTGAAGC CTGCATGGCT CTCTCGCGGG GAGGAAGCGA TGTGTACGGT
ATTACCAAGC TCATGACCGC AGGTCTTCCC GGGAAACGCC GATGCTTTGT CCCTACCCGC
TGGGCAATAA CGGCAGTTGA TGATACGATT TCTACAGCGC TCAAAAAAGA GATAGCACGG
TATCCTCCTC TTGATGAGTA CCTGGTCTTT TCCGGAGAGG TATTTTCCAA CCGGATAGTC
TGTATCCTCG CCCCGGGAGA CTGGCGGTAC GAGATGATCG AGATCTGGGG AAAACAGACC
CTCTGGGCCG GGGATGCAGA GGTGATCGTC CAGGATCGTG AAGGGATGAC CAAACAGGGG
TACTCCCCTA TTTCAGGTGC CTATTACTCA GCTCGTCTGG CTGCGTGTGA GTACCTGGCC
CGGGTACGGC ATTCTGCCCG GGTCATTGTG CTGCGTCATA TATCCAGCGA CTACTGGGCG
CCGCTGGGAA CCTGGGTGAT CCGGGAAGCG ACAAGAAAAG CAATGGCGTC CCCTCCTGTC
TCCTGTGAAT CCTTGGAAGC AGCCGTTGCC ACCGCATCTG CCCGGATCGG GTTTTCGCAC
TGGCAGCAGC ACAGCACGCT CATCCCCGAG ATGCGTACCC AGAGATCCCT TTTCTCGTTC
TGA
 
Protein sequence
MQCISCKGKG LCGLPRCPIT SRFLAQTDVK ISASYQGSAP SVFVGSFGYP DIRRGPLLID 
DSDHPPDWLT RGLGIEDIVS LRARTICGRS PARHVEGGLQ EIARSSLPLE VDVAFSRPVS
FAMTFDGTVA PMGFSGEIRR LDVVGSAKVE RIVDRITGDT DLGAGEACMA LSRGGSDVYG
ITKLMTAGLP GKRRCFVPTR WAITAVDDTI STALKKEIAR YPPLDEYLVF SGEVFSNRIV
CILAPGDWRY EMIEIWGKQT LWAGDAEVIV QDREGMTKQG YSPISGAYYS ARLAACEYLA
RVRHSARVIV LRHISSDYWA PLGTWVIREA TRKAMASPPV SCESLEAAVA TASARIGFSH
WQQHSTLIPE MRTQRSLFSF