| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_2156 |
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| Symbol | |
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| ID | 5410132 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | + |
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| Start bp | 2227311 |
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| End bp | 2228963 |
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| Gene Length | 1653 bp |
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| Protein Length | 550 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640869401 |
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| Product | DNA ligase I, ATP-dependent Dnl1 |
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| Protein accession | YP_001405313 |
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| Protein GI | 154151695 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1793] ATP-dependent DNA ligase |
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| TIGRFAM ID | [TIGR00574] DNA ligase I, ATP-dependent (dnl1) |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.521071 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGTTCT CTGAGTTCGC TCAGGTTTGC GAAGAACTGG AACATCTCTC CGGCCGTCTG
GATATGATCG AGGTGATCAG CCGGGCGCTG CCGGATCTCG CACCGGATGA GCTCCCGGTC
TTTGTCCGGT TTGTCATGGG CAGGATCTTC CCCGACTGGA GTGCCCAAAA ACTGGGAATA
GGGCCGAATC TCCTCTATGA GGCAGTCCGC CAGGCCGCCG GGGTAAAACT GGAGACAGTC
ATCACCCGGA TTAATCAGCA GGGGGACGTT GGAAGAGCCG TTGAGGATAT CCTGGCAAAA
AAAACCCAGG TTTCCTGGTC ACACCAGGAT CTCGAACTGG TCTATGTCTA CAACAAACTA
ACGGGAATAT CCTCCCGTGG AGGAGTTACA TCCCAGAAAG AGAAGATCCG TATTGCCATG
CTCCTCTTAG GTGATGCCTC ACCACTTGAA GGACGGTACC TCGCCCGGAT CATGCTTGAA
GAGCTCCGGA TAGGGGTGGG TGAGGGAACC GTCCGTGAAG CAATCGCAAA AGCGTTTATG
GTTGACTCTG CACTGGTCGA GCATGCGATG CAGGCCATCA ACGATCTCGG GGAAGTGGCA
CGGCTTGCAA AGAAAGGGCC CACTGCCCTT TCGGATGTAC ATATAACGCC CTTCCATCCG
GTGAAGATGA TGCTTGCCCA GCAGGGAACG ATTGCCGGCA TGATCGAAGA TCACGGCGAG
ATTGCAGCAG AGTACAAGTA CGACGGGTCC CGTTTCCAGT TCCACAAGGA GGGGGCAAAA
GCGAGGATGT ACTCGCGCCG GCTCGAAGAT GTCAGCGAGG CGCTCCCCGA TGTGATTGAC
CTTCTTTCCA AAGCAACCTC CCATGATGTG ATCCTTGATG GTGAGGTGAT CGCGATCAAG
GACGACCGGC CCATGCCGTT CCAGTCGGTA CTCCGCAGGT TCCGGCGCCG GCATGATATC
GCCGAGGCAC AAGAGGCAAT ACGCATGGTG CCAAACGTCT TCGATATCCT CTACCTCGAT
GGCGAAACCC TCATCGATCT GCCATTCTTT GAACGGCGTA AGAAACTGGA AACCGTGGTC
GGGAAGTTCG TGGCACCACA AGTGGTAAGC ACAGATCCGC AGACAATAGA GCAGACATAC
CACGACGCAC TCGCCGCGGG GCATGAGGGA ATTATGCTTA AGGTACCGGC GTCCCCCTAC
ACCCCGGGCC AGCGGGGAAA GAACTGGATC AAGATCAAGC CAGAAGTGGA CACACTCGAC
CTCGCCGTTA TCGGGGCCGA GTGGGGCGAA GGGAAACGGG CCCATGTCTT TGGGTCGTTT
CTTGTTGCCT GCCAGGACCA GGGTAAGCTG ATCCCGCTCT CCCGGGTGGC CACCGGGTTT
TCAGACGAGC AGCTGACCGA GGTATACGAT CTCCTCAAGG ATGCAGTGAT CTCGCGCACT
GGAAAAGAGG TACGCTTTGA ACCGGAGCTG GTTTTTGAGG TAGGATATGC CGAACTCCAG
GTCAGCCCGA CCTATGATGC CGGATTTGCC CTCAGGTTCC CCCGGTTTAT CCGGATCCGC
GATGACAAGG ATACCACCGA GATCGAGACC CTGGAGAGCA TCAGGGGCCG GTACCAGCGG
CAAGCAAAAT CGGCACAGGC ATACACAAAA TAG
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| Protein sequence | MLFSEFAQVC EELEHLSGRL DMIEVISRAL PDLAPDELPV FVRFVMGRIF PDWSAQKLGI
GPNLLYEAVR QAAGVKLETV ITRINQQGDV GRAVEDILAK KTQVSWSHQD LELVYVYNKL
TGISSRGGVT SQKEKIRIAM LLLGDASPLE GRYLARIMLE ELRIGVGEGT VREAIAKAFM
VDSALVEHAM QAINDLGEVA RLAKKGPTAL SDVHITPFHP VKMMLAQQGT IAGMIEDHGE
IAAEYKYDGS RFQFHKEGAK ARMYSRRLED VSEALPDVID LLSKATSHDV ILDGEVIAIK
DDRPMPFQSV LRRFRRRHDI AEAQEAIRMV PNVFDILYLD GETLIDLPFF ERRKKLETVV
GKFVAPQVVS TDPQTIEQTY HDALAAGHEG IMLKVPASPY TPGQRGKNWI KIKPEVDTLD
LAVIGAEWGE GKRAHVFGSF LVACQDQGKL IPLSRVATGF SDEQLTEVYD LLKDAVISRT
GKEVRFEPEL VFEVGYAELQ VSPTYDAGFA LRFPRFIRIR DDKDTTEIET LESIRGRYQR
QAKSAQAYTK
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