Gene Mboo_2108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_2108 
Symbol 
ID5410642 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp2181992 
End bp2182543 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content59% 
IMG OID640869353 
Productsecreted protein-like protein 
Protein accessionYP_001405265 
Protein GI154151647 
COG category[S] Function unknown 
COG ID[COG5513] Predicted secreted protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGAAAT CTTACGTTAT GGGGGCGCTG TGCTGCACCC TTATCCTTGC AGCCCTTGTA 
ATTGCAGGAT GCACGCAAAA TGCCGCACCC GCCCCGGCCA CACCGGCTGC CACGGCGGTT
CCTGTGGCGA CTACACCCGT TGCCAGCGTA CCGGCAGCAA CGGCCATTTC GACTACCTCC
TCCATTGTAC AGACCATGAC ACCAACACCC ACCACTTCCG GCAATTCAGC AACCACGATT
CCGGTGAACA GCTCATCGAA CGGGGATATT CTGACCATCC CGGCCAGCAA CCAGGTTCTT
GTCACCCTCG CGGAGAACCC GACTACGGGA TACCAGTGGA ACGCCACGGT TTCAAAAGGC
CTCTCCGTGG TCTCGGATAC CTATGTTGCG CCGAACTCTT CCCTGATCGG GGCCGGCGGG
TACCACGAGT GGCTCCTTGC GCCTGACACG GTGGGCACGT ACACGTTCCA GGCGGTCTAC
ATGCGTTCCT GGGAAGGTCC GTCATCCGCT GCCAACACCT TCAGCATCGT GATTGAGGCA
ACCTCGAAGT GA
 
Protein sequence
MRKSYVMGAL CCTLILAALV IAGCTQNAAP APATPAATAV PVATTPVASV PAATAISTTS 
SIVQTMTPTP TTSGNSATTI PVNSSSNGDI LTIPASNQVL VTLAENPTTG YQWNATVSKG
LSVVSDTYVA PNSSLIGAGG YHEWLLAPDT VGTYTFQAVY MRSWEGPSSA ANTFSIVIEA
TSK