| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_2013 |
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| Symbol | |
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| ID | 5411894 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | + |
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| Start bp | 2083338 |
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| End bp | 2084477 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640869255 |
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| Product | ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein |
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| Protein accession | YP_001405170 |
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| Protein GI | 154151552 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.258799 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.135742 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTCCAA AATTTCACAA CAGGAAAAAA GAGCTTGCCG TAATAGCGGC AGTATCCCTC
TTCATCCTGC TTTTCCTCAT TATTGCAGGA TGCACACAGA ATAGCAGCAG CACGAACTCC
GCAGGATCCT CCGGTGCAGT AGCCTCGGTT TCATCCGGGG TAAATTCTTC CTTCTACACG
ATCCGGGCAA ACGTGAATAA GGACTGCTCG GGAACTCCCT GGTATGTCGG CGTGATGAAA
GGCTATTTTG TTAGCGGCGG CATTAATTTC GTTGACGCCG GTGCCCTTGA CTGGTCTCTC
CAGCCGGCAG CTCTCGTCTC CGGACAGACC GACGTGGTGG ATGAACACCC CAACACGCTC
ATCGATCTTA AGCTTGCAGG AGCCAATGTC ACTGGTGTCG CACTCAGCGG GCAGGAACCC
CCTGAGGGCG ATATAAGTGA ATACCACATG CAATGGCTGG TTCTCAACAG CAGTCCCTAC
TATACGATTC AGGATCTCGT TGCAAACGGT CACAAGCCAA AGATTGCCGT CGGTGCACTG
GGTATCTGTG CGGACCTGGA GAATAACGCA TGGTTCCGTG CGAATAACCT ATCAAACACG
AGTTTCCAGT ACGTCATAAT GCCCGATCCG CAGCAGGAAG CAGCTCTCCG TTCCGGACAG
ATCGATGTTG CAGTCCTCCA CCCGCCATTC TATACAGCGG CTGAAAAACA TGGCGGTGTC
CGGGTCATTA CGACTAGTTA TGATGCATTC GGACCGCAGG CGGGTACAAC CCTGCTTGTC
TTCAGAGATG CTGACATCCA GGAACACCCG GATGATGTAA GAGCGTTCAT TAAAGCGTAC
AAGAATGCGG AGAGATGGTC TGACAACCAC CTGACAGAAT CCGGTATACT GACTGCCGGT
GTCATAGGGC TTTCCAATGC AACTCCTCAC TACTACAGTC AATCGGGTGC AATTACGGAT
GACGAGATCC AGCCGTGGAT AGACGCAATG GTTGCAGACG GTGACATTGC GCCGGGACAG
TTCAAACCCT CGGATCTGTA TACGACTGAG TTTAGCGATA CGTGGGTAAA TGAAACCGCG
GTCAATGGAC CGGATCCGGT TGATCCCTTC CCGAGCCTGG AAAAGAGCAC ATACGACTGA
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| Protein sequence | MTPKFHNRKK ELAVIAAVSL FILLFLIIAG CTQNSSSTNS AGSSGAVASV SSGVNSSFYT
IRANVNKDCS GTPWYVGVMK GYFVSGGINF VDAGALDWSL QPAALVSGQT DVVDEHPNTL
IDLKLAGANV TGVALSGQEP PEGDISEYHM QWLVLNSSPY YTIQDLVANG HKPKIAVGAL
GICADLENNA WFRANNLSNT SFQYVIMPDP QQEAALRSGQ IDVAVLHPPF YTAAEKHGGV
RVITTSYDAF GPQAGTTLLV FRDADIQEHP DDVRAFIKAY KNAERWSDNH LTESGILTAG
VIGLSNATPH YYSQSGAITD DEIQPWIDAM VADGDIAPGQ FKPSDLYTTE FSDTWVNETA
VNGPDPVDPF PSLEKSTYD
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