| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1949 |
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| Symbol | |
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| ID | 5412104 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | - |
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| Start bp | 2014510 |
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| End bp | 2015895 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640869190 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_001405107 |
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| Protein GI | 154151489 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.724461 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTTCCG TGATGATGGT TGATGATGAT CCGGCGATTC TGGATGTTAC CCGGCAGGTA
CTGGAGAGAT CGCACGAGAT CACTGTCCGA CCGGTCATTT CAGCACGGGA AGCCCTCGAA
CTGCTTGATA AGAATAGTTT CGACGCCATC GTTCTTGATT ACGATCTGCC CGAGATTAAC
GGTATTGAGT TCCTGAAAAT TATCCGGGGC AAGGGAATTG TCACGCCGGT CATCATATTC
ACCGGTGTCG GGCGGGAAAA TGCAGCGATC TCTGCGCTCA ATAATGGAGC CAATTTCTTC
TTAAAAAAGG GCGAGAATCT GGAGATGCCG TTTATCGAGC TCCAGCGGAT GATCCGGCAT
GCGGTTGACC AGCGCTTCAT GGGAAAGGCA AAAGGTCTTG CCAGAAAGAT TGTTTTCGAC
CTGCTCAATT TTTCCCTTGA TGCCGGTTTT GCCATTGATC CGGATGGGAA CGTGCTGGTA
TGGAACCGGG CCATGGAACA GCTGACCGGC ATGCCATCGC ACGCGGTGAT GGAAAAGGGC
AATTACCTTT ATGCAGAGCC ATTTTTTGGC AAACGCCAGA AGATGCTCAT CGATTTTGTT
TTTTCCTCTG ATGAGAACAT CCGCAAAGCC CGGTACATGG TCATCAGCAG GGAGAAGAAC
GGGCCGGTCG TGGCGGTAAC CCGGGCGCGG AAACCGGATG GGACGGAATG GACGCTCTGG
ATGAAGGCAA CCCCACTCTT TGACAACCAC GGGGAGTTCG TTGCTGCGGC CTGCATTGTC
CGCGATGTCA CCACTACATT CCGTGATGTC AGTATCGAGG AGGAATCGGA AGCCGGGACT
TCTCCGGCAG CTGCAAACGG CGAGGCTCAG CCCTCGGGCA GCGGGGGTTT CATCGACCGT
ATCCTTGGCC GGGCAATGGG GCAGTACAAA GAGGGAGTAG TCCTGTATGC CCGCAACCGG
AATTACCGCG GGGCGATCGA GGCGTTCGAG CGGGCGATCG AGATCGACCC CAAACTTCCC
CATGTCTGGA ATGACCGGGG GATCTGTATA CGGGCGCTGG GCGATTATGA TGAGGCGCTC
AAATCGTTCC TGCGTGCTGT GGAACTCTCC CCTCAGAATC CCGAGATCCT GTACGAGCTT
GGCGAAACGC TCGAACAGAT GGGGGTAATG CAGATGAACA ACCGGTATAT CGAAGCGGCA
GTGGAAACCT TCAAGATGGT GGTTAATAGC CTGCCAAACA ACATGGATTC CTGGAACCAT
ATCGGCATCT GCTTAAAGGA ACTGGGAAAA CCCGAGGAAT CTAAGTTCTA TTTTGACCGG
GCCCGGGACA TTAAACTCTG GAAGAAGGAT ACACCCGTTC CGCGGAAGCG CAACGAGTTC
CTGTAA
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| Protein sequence | MLSVMMVDDD PAILDVTRQV LERSHEITVR PVISAREALE LLDKNSFDAI VLDYDLPEIN
GIEFLKIIRG KGIVTPVIIF TGVGRENAAI SALNNGANFF LKKGENLEMP FIELQRMIRH
AVDQRFMGKA KGLARKIVFD LLNFSLDAGF AIDPDGNVLV WNRAMEQLTG MPSHAVMEKG
NYLYAEPFFG KRQKMLIDFV FSSDENIRKA RYMVISREKN GPVVAVTRAR KPDGTEWTLW
MKATPLFDNH GEFVAAACIV RDVTTTFRDV SIEEESEAGT SPAAANGEAQ PSGSGGFIDR
ILGRAMGQYK EGVVLYARNR NYRGAIEAFE RAIEIDPKLP HVWNDRGICI RALGDYDEAL
KSFLRAVELS PQNPEILYEL GETLEQMGVM QMNNRYIEAA VETFKMVVNS LPNNMDSWNH
IGICLKELGK PEESKFYFDR ARDIKLWKKD TPVPRKRNEF L
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