Gene Mboo_1917 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1917 
Symbol 
ID5410115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1979637 
End bp1980623 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content56% 
IMG OID640869155 
Productphosphate binding protein 
Protein accessionYP_001405075 
Protein GI154151457 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0226] ABC-type phosphate transport system, periplasmic component 
TIGRFAM ID[TIGR02136] phosphate binding protein 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.266865 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCCA ATCGGAGTTC ATATCTCTTG GTGACAGCAT GCCTCTTGGC ATTGCTCATT 
GCATCGCTTA TCGTTGCCGG ATGTACCAGC AACGGATCAA CAAACTCTGC CACGGTATCA
CCGGCGGCAA CTGCCGCGCC CACTGCGGCC CCGGCAACGG CTGCTGCCAC AGCAGCGGCA
ACCGCAGCAG CAACCCAGAG CTCAAACACC ACTGCTTCTT CCGGCCAGAC GCTTACCCTG
ACAGGTTCGA CCACCGTTCT GCCCATTGCT CAGGCTGTTG CTGATGCTTA CATGCAGAAC
AACCCTAACG TAAACATTCA GGTTTCCGGC GGAGGATCCG GTGTCGGCGT CCAGGCTATC
ATTAACAAGA AAGTAGATAT CGGGATGAGC TCAGCTGCGG TCTCTGCAGC ACAGCAGGCA
CAAGACCCTC AGATGAATAT CATTACGATT GCCCACGATG GCATTGCAAT CATTGTGAAC
CCTGCAAACA CCATCCAGGA CATCTCTCTT GACCAGGTCA AGGCCATCTA CAATGGCAGC
GTCACTTCTT GGACTTCCGT CCCTGGCGCC GGTGTGCCCA ACTCCAACAA CCAGATCGTG
CTTGTCGGCC GTGACAGTTC CTCGGGAACC CGTACCTACT TTGACCAGTT CGTTATGCTG
AATACCAACG ACTCCCTGTC CATGCATGAG GATAACTCCA ACGGAGCAGT CCTTCAGGAA
GTTGCCCAGA CCCCGGGTGC TATCGGGTAC ATCTCCATCG GCTACCTCAC GTCCGATGTC
AAGGCAGTCC CGATCTTAAC CACAAACGGC CATGTCATCG CCCCGAGCGT TGCGACCGTC
AAGGACAAGA CCTACCCGAT CCACCGCGAT CTCTACATGA TCACTAACGG ACAGCCCACG
GGTCTTGCGA AGGATTACCT CGACTTCCTC CTCAGCACAC AGGGCCAGCA GATCGTTGTT
GCACAAGGGT ACGTCGCCCT TCCCTGA
 
Protein sequence
MKANRSSYLL VTACLLALLI ASLIVAGCTS NGSTNSATVS PAATAAPTAA PATAAATAAA 
TAAATQSSNT TASSGQTLTL TGSTTVLPIA QAVADAYMQN NPNVNIQVSG GGSGVGVQAI
INKKVDIGMS SAAVSAAQQA QDPQMNIITI AHDGIAIIVN PANTIQDISL DQVKAIYNGS
VTSWTSVPGA GVPNSNNQIV LVGRDSSSGT RTYFDQFVML NTNDSLSMHE DNSNGAVLQE
VAQTPGAIGY ISIGYLTSDV KAVPILTTNG HVIAPSVATV KDKTYPIHRD LYMITNGQPT
GLAKDYLDFL LSTQGQQIVV AQGYVALP