Gene Mboo_1883 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1883 
Symbol 
ID5411377 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1952653 
End bp1952919 
Gene Length267 bp 
Protein Length88 aa 
Translation table11 
GC content57% 
IMG OID640869121 
Product50S ribosomal protein L31e 
Protein accessionYP_001405041 
Protein GI154151423 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2097] Ribosomal protein L31E 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.230339 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGAAG AGATGAAAGA GCATATCTAC ATCATCCCCC TCCGGGATGC CCGCAGGATG 
CCACGGTGGA AGCGTGCCAA TGGCGCGATC AAGGATATCC GCAAGTACCT TGCCAAGCAC
ATGAAGACCG AGGACGTCAA GCTTGACAAG ACCATCAACG AGAAGGTGTG GAGCAGGGGA
GCCGAAAAAC CGCCCTCAAA AATCCGCGTC CGCGCCATGA AGATGGAGGA CGGGCAGGTC
CAGGCGGAAC TTGCCCTGGA ATCGTAA
 
Protein sequence
MAEEMKEHIY IIPLRDARRM PRWKRANGAI KDIRKYLAKH MKTEDVKLDK TINEKVWSRG 
AEKPPSKIRV RAMKMEDGQV QAELALES