Gene Mboo_1839 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1839 
Symbol 
ID5411840 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1918141 
End bp1919427 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content60% 
IMG OID640869075 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_001404997 
Protein GI154151379 
COG category[C] Energy production and conversion 
COG ID[COG1148] Heterodisulfide reductase, subunit A and related polyferredoxins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.618665 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGGAG GCGGCGTTGC CGGCATCCAG GCAGCGCTCG ACCTCGCAAA CCACGGTATT 
ACCGTCCACC TCATTGAGCG GGAGCCCACG ATAGGAGGGC ACATGGCCCA GCTCGACAAG
ACCTTTCCCA CAAACGACTG CTCCATGTGC ATCCTCTCAC CCAAGATGGT GGATGTCCAG
CGGCACAAAA ACATCAGGAT CCATACCCTT GCAGAAGTGG AACAGGTCGA GGGAAAGGCC
GGTGATTTTA AGGTAACCGT CCGCGAACAC CCGCGCTATA TCGACATGGT GGCCTGCACC
GGCTGCGGCG ACTGCATCGA GGTCTGCCCG GTCGAGGTGT ATAACCGGTT CGATGCCGGG
GTAGGGGTTC GAAAAGCAAT CTACAAACCC CATCCGCAGG TGGTACCCGA CCGCGTAGTC
AAGGACAATG AGCACTGTAT CGAGTGCGGG CTCTGCTATG ATTCGTGCGG CCCGCAGGCG
ATCCTGCGCG AAGATACGGA GAAAGAGACC ATCATCACCG CATCGACAAT TGTCGTTGCC
ACCGGTTACG ATGTCTTTGA CGCACAAAAG AAAGGCCCGC TCGGGTACCT GAAATATCCC
GATGTGATAA CAAGCCTGGA ACTGGAGCGG ATGATCAATG CCAGCGGGCC GACCAGCGGG
AAAATCCGGC GCTTAAGCGA CGGCAGGGAA CCCGAAAGTA TTGTCTTTAT CCAGTGCGTG
GGTTCGCGGG ACGCCCCCTT ACGCCGGCCC TGGTGCTCCT GTGTCTGCTG CATGCAGGCA
ATGAAAAACG CAATGCTTAT CCGGGAGAAG CACCCGGAGA TCGCAGTCAC GATCTTCTAC
ATGGACGTCC GTGCCTACGG CAAGGGGTAC GAGGAGTACT ACGAGCGGGC AAAGAGTGTC
GGTGTAAAGT TCCTGCGCGG GATGCCCTCC GATCTCCATG CAGACGCCAG CGGAACCGGC
CTCTCCTTCC AGGTGGAGAA CACCGAGACC GGGGAGATCG AGGTCCTCCG CCCGGGCCTT
GTGGTGCTCT CGGTGGGAAT TGAGCCCTCG GGTGCCACCG CGGCACTTGC GGAGAATCTC
GGCCTTCCAC TTGAGGAGAG CGGGTTTTTG CGCTCTCTGC ATGACGCTGT CGATACCGCG
GGGACGGTCC GGCCGGGAAT CTTTGTTGCC GGTGCGGCAG TCTCTCCCAA GGATATCCCC
GACAGCGTGG CCTCGGGCGG GGCTGCGGCC ATGCGGGCAT TTGCAGGGGC AAAAAAGAAA
ACGGCAGCGA GGGCGCGATC CCGGTGA
 
Protein sequence
MIGGGVAGIQ AALDLANHGI TVHLIEREPT IGGHMAQLDK TFPTNDCSMC ILSPKMVDVQ 
RHKNIRIHTL AEVEQVEGKA GDFKVTVREH PRYIDMVACT GCGDCIEVCP VEVYNRFDAG
VGVRKAIYKP HPQVVPDRVV KDNEHCIECG LCYDSCGPQA ILREDTEKET IITASTIVVA
TGYDVFDAQK KGPLGYLKYP DVITSLELER MINASGPTSG KIRRLSDGRE PESIVFIQCV
GSRDAPLRRP WCSCVCCMQA MKNAMLIREK HPEIAVTIFY MDVRAYGKGY EEYYERAKSV
GVKFLRGMPS DLHADASGTG LSFQVENTET GEIEVLRPGL VVLSVGIEPS GATAALAENL
GLPLEESGFL RSLHDAVDTA GTVRPGIFVA GAAVSPKDIP DSVASGGAAA MRAFAGAKKK
TAARARSR