Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_1650 |
Symbol | |
ID | 5411195 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | - |
Start bp | 1727028 |
End bp | 1727489 |
Gene Length | 462 bp |
Protein Length | 153 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640868884 |
Product | hypothetical protein |
Protein accession | YP_001404810 |
Protein GI | 154151192 |
COG category | [S] Function unknown |
COG ID | [COG4854] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.783032 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.00144728 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAAAAA ACATCTTCTA CCTGATGACC GGTCTCGTCG CAGTTGTGCT GCTGGCGATC TTCTGGTATT CAGTAGAAAA TTTTACCCCG CTGTTTTTTA CGATCGCTTT TGTGGCAGGC ATCGTTCTTC TTTACCTTGC CTACCGGAAG GTCGAGGATT TTATTGAGGA CGAACGGAGT GCACGGATCA CCGAAAAGGC TGCCACACGG ACACTTCAGG TTTTCTGGGT CTGCTTCTGT GCGTTTTCAA TCCTCGCCGT GATGAACCTG CTTGACATGC CCCGTTTTTC CCGTGCATTC TGGCTGAATC GCGGAACCGC GGTAGTTCCT CCGGAAGTAT TGCCGCTGAA ACTGATTGGC TACTTCCAGC TGGCATTGCT CTGCCTGATG ATCTTCCTGT ATGTCGGGTT CAGGATCTAC TACGCACGAA AGTTCGGGGA CTGGGAGTCC GATGAAGAAT AA
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Protein sequence | MKKNIFYLMT GLVAVVLLAI FWYSVENFTP LFFTIAFVAG IVLLYLAYRK VEDFIEDERS ARITEKAATR TLQVFWVCFC AFSILAVMNL LDMPRFSRAF WLNRGTAVVP PEVLPLKLIG YFQLALLCLM IFLYVGFRIY YARKFGDWES DEE
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