Gene Mboo_1650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1650 
Symbol 
ID5411195 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1727028 
End bp1727489 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content50% 
IMG OID640868884 
Producthypothetical protein 
Protein accessionYP_001404810 
Protein GI154151192 
COG category[S] Function unknown 
COG ID[COG4854] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.783032 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.00144728 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAAAAA ACATCTTCTA CCTGATGACC GGTCTCGTCG CAGTTGTGCT GCTGGCGATC 
TTCTGGTATT CAGTAGAAAA TTTTACCCCG CTGTTTTTTA CGATCGCTTT TGTGGCAGGC
ATCGTTCTTC TTTACCTTGC CTACCGGAAG GTCGAGGATT TTATTGAGGA CGAACGGAGT
GCACGGATCA CCGAAAAGGC TGCCACACGG ACACTTCAGG TTTTCTGGGT CTGCTTCTGT
GCGTTTTCAA TCCTCGCCGT GATGAACCTG CTTGACATGC CCCGTTTTTC CCGTGCATTC
TGGCTGAATC GCGGAACCGC GGTAGTTCCT CCGGAAGTAT TGCCGCTGAA ACTGATTGGC
TACTTCCAGC TGGCATTGCT CTGCCTGATG ATCTTCCTGT ATGTCGGGTT CAGGATCTAC
TACGCACGAA AGTTCGGGGA CTGGGAGTCC GATGAAGAAT AA
 
Protein sequence
MKKNIFYLMT GLVAVVLLAI FWYSVENFTP LFFTIAFVAG IVLLYLAYRK VEDFIEDERS 
ARITEKAATR TLQVFWVCFC AFSILAVMNL LDMPRFSRAF WLNRGTAVVP PEVLPLKLIG
YFQLALLCLM IFLYVGFRIY YARKFGDWES DEE