| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1648 |
|---|
| Symbol | |
|---|
| ID | 5411193 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | - |
|---|
| Start bp | 1724978 |
|---|
| End bp | 1726345 |
|---|
| Gene Length | 1368 bp |
|---|
| Protein Length | 455 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 640868882 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001404808 |
|---|
| Protein GI | 154151190 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.544844 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.00111677 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTTTC ATGCTGCTTG CATTGGAATC CTGCTGGTGT TTTTGATGGT TGCCGCCGCC
AGTGCCGGCT CCACCAGTTC AACAACCTCT ACAGGGAGTA CAACGTCCAG TACGAGTTCT
GTCAGTGCGT CGACTACTGT TTCAGCCGAA CAGGCGTTGT CGCAGGTGTA CGTCAGTTCG
GTCACGGTAG ATCCGCAGGT ATTTTATCCT GGCGATCAGG GAACGATCAC CGTTCAGCTG
ACAAACAGCG GTACTCAGGA AGTTGCATTT GAACATGCAG ATATCCTCAA TTCCCAGAAT
GTCTATATCC CTGACGAGCT CCACAATCCC TACCAGGTCA TGACCTATCT TGGGCCCGGT
AATACGATGA CCTACACATT CAATGTCGTT GCAAAAGGGT CTGAGGGAAT ATACTACCCT
GATTTCAGTG TGGCTTCACG GGATTCCGCC AGCATCATTT ATCCCATCAA GGTTCAGGTT
GACTCGACTC CTGTTCAGGA AACCATCACT CTTCGGCCGG ATAATTTTGC CCTTGATAAT
ACGGATACGG TCAATCTCAC GATAACCAAC CCGCGTAACG GTGCTATCGA CAATGTTGAG
GTAACACCTT CAGGTACCGG TTTTGGAATC TCCCCACTCC AGTCGTTCAT CGTGTCCATC
CCCGGGGATT CATCGGTAAA TATCCCCTTT GCCATTACTC CTTATCAGGC AGGGTCCAAC
GTGACATTCA CGATCCAGTA CAGCAACGGG CAGACAATCC AGAACCCCCA TACGGACACC
GTAGTCCTGC CTCTCAATAT CGGGCCGAGC AAGACTGCTG CAACGACTGT AATCAATGAT
CTTGCTCTTA CCGTCAGCAA TGGCGCGTAT CAGCTGACCG GGGATGTCAC CAATACCGGT
ATCACCGATG CAAACGGCGT TGTTGTCACG GCTGGAGCCC CGGCCCAACC GGTCGAACCC
TATTCAAGTT ACGCCGTGGG TTCGCTGACG TCCAATGATT TCTCCAGCTT CACCCTCACC
TTTACTGCAT CCGATCTCTC TGCAATCCCG ATTACGACTC AGTGGAAGGA CGCAAATGGT
AACACCCTCT CCTCCACCCA GACGTTCGAT CTCCGTTCAC TTGCCAGTGC TGCAGAATCC
GGTACCCGGA GTGGAAGTTA CTCCGGAGGA TCGAGTACTG GTGTTTCATC ATCTGCAAGC
GGGTATGGCG GAGCCGCACG TGGCGGCGGC CTGTTTGGGA TTGGTGGCGG CCGTGGCGGT
GGCCTCTCAT CTTTCTACCC GGTCATTATC GGTGCGATCG TAATCATCGC GGCAATTGCG
CTCTACGTCA AGAGGAAATG GATCCTTGGC AAATTCAGGA AGCAGTGA
|
|---|
| Protein sequence | MKFHAACIGI LLVFLMVAAA SAGSTSSTTS TGSTTSSTSS VSASTTVSAE QALSQVYVSS
VTVDPQVFYP GDQGTITVQL TNSGTQEVAF EHADILNSQN VYIPDELHNP YQVMTYLGPG
NTMTYTFNVV AKGSEGIYYP DFSVASRDSA SIIYPIKVQV DSTPVQETIT LRPDNFALDN
TDTVNLTITN PRNGAIDNVE VTPSGTGFGI SPLQSFIVSI PGDSSVNIPF AITPYQAGSN
VTFTIQYSNG QTIQNPHTDT VVLPLNIGPS KTAATTVIND LALTVSNGAY QLTGDVTNTG
ITDANGVVVT AGAPAQPVEP YSSYAVGSLT SNDFSSFTLT FTASDLSAIP ITTQWKDANG
NTLSSTQTFD LRSLASAAES GTRSGSYSGG SSTGVSSSAS GYGGAARGGG LFGIGGGRGG
GLSSFYPVII GAIVIIAAIA LYVKRKWILG KFRKQ
|
|---|
| |