Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_1646 |
Symbol | |
ID | 5411191 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | - |
Start bp | 1723097 |
End bp | 1724287 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640868880 |
Product | hypothetical protein |
Protein accession | YP_001404806 |
Protein GI | 154151188 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0000328071 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGAAGGATA TCTTCTTTGA TCTTTCGGTC CGGAGTGTCC GGCTCAACTT CCTGCGTTCC CTTCTTGCTT CTATTGGGAT CGTGATCGGG GTAGTTGCCA TCTCATCCAT GGGGATGCTC GGAACCAACA TGCAGCTCTC GGTAAAAGAC CAGCTCTCGG CAGATGTCAA TACGGTCATG CTCACTTCTG ATGTCGTGAA AGTAAGCAGT GGTCTCGGGG CTGCCCCGGT TTCAAGTACA ATTGATGAAA GCACCCTCAA TGATATCAAA GGCTCCGCAG GACAGAATGA TGTAGTGCCG ATCCATCATA CGAGTACGCA GTTTAGCGTT GGTGACCAGA ATGGTCGCGG ATCGATCTAT GGGCTCGACC CCAGTGATGT CCCAAAATTC CTTACCATCG CACAGGGATC AAATATCCGG GGCAGTGATG TCCTTGTGGG CGCAACCATT GCCAGCAATT TTAACCTTGT GGTTGGAAGC ACGATCAAGA TCGGTGAGAA TTGTGCCACC GTTTCACGGC CGGTGGTCAG GGTTGCCGGG ATTCTCCAGG CCCGGGGCAT TGCGGCCGAT GGCGTAAACG TGGACAATGG GATTGTGGTA GACGATACCT GGTACACAGA TCACTTCGGA GGCCTGGACC AGTACGACCA GGTCAACGTG ATAGTAGCTG ATGTTGATAC CATCAACCAG ACCGAAGCGG CGATCAACGC AAAGGTCAAC CGGAACAGCG ATGTGGTCAG GGTCTCCGAT GCCAGTTCCC GGTTGTCGAC CATTTCAAGT ACACTTGGTA CGATTACCAC GTTTATCATG GCGATCGGCG GTATTTCGCT TGTGGTCGCT GCGGTAAGTA TCTTTAACGT CATGATGATG TCGGTCAAGG AACGGGTCCA GGAGATCGGG ATTCTTCTTT CGATCGGAAC GGAGAAAGGT GAAGTCCGCA GGATGTTCCT GTACGAGGCA TTAATCCTCG GTATCATTGG TGCGGTGGTG GGCGGAATCA TGAGCTTTAT CATCGGCTAC TCGGTCGTGA GTGCCATGAT CGGCTCCACC CAGTACTTCT TTACCCCGGA CAGCCTGATC TTCATCCCGT ACGGGATGAT CATCGGTGTG GTTGTCTGCG TGGCATCCGG TATGTATCCC GCGTGGGCGG CTTCGAATAT GGACCCGATA GACGCCCTTC GGGCTGATTA A
|
Protein sequence | MKDIFFDLSV RSVRLNFLRS LLASIGIVIG VVAISSMGML GTNMQLSVKD QLSADVNTVM LTSDVVKVSS GLGAAPVSST IDESTLNDIK GSAGQNDVVP IHHTSTQFSV GDQNGRGSIY GLDPSDVPKF LTIAQGSNIR GSDVLVGATI ASNFNLVVGS TIKIGENCAT VSRPVVRVAG ILQARGIAAD GVNVDNGIVV DDTWYTDHFG GLDQYDQVNV IVADVDTINQ TEAAINAKVN RNSDVVRVSD ASSRLSTISS TLGTITTFIM AIGGISLVVA AVSIFNVMMM SVKERVQEIG ILLSIGTEKG EVRRMFLYEA LILGIIGAVV GGIMSFIIGY SVVSAMIGST QYFFTPDSLI FIPYGMIIGV VVCVASGMYP AWAASNMDPI DALRAD
|
| |