Gene Mboo_1612 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1612 
Symbol 
ID5412207 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1687166 
End bp1688263 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content59% 
IMG OID640868846 
Producthypothetical protein 
Protein accessionYP_001404772 
Protein GI154151154 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1980] Archaeal fructose 1,6-bisphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.160162 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAAAGA CCACCATCTC CGTTATTAAG GCAGATGTAG GAAGTTTCCC CGGCCATTCC 
CGCGCCCATC CCAAGCTGCT TGAAACCGCG GCGCAGATGC TCAGGGCCGA GAGGGGAAAA
CTCCTCCTTG ATTCCTTTGT CACCCACTGC GGCGATGATC TCGAACTGGT CATGACCCAT
TCCCATGGGG CCAACAGCGA GGCCGTTCAC CGCCTTGCGT GGAATGTTTT TGCCGAATGC
ACAAAAGTTG CAAAGAGATT CAAGCTGCAC GGTGCCGGCC AGGACCTCCT TGCCGAAGCC
TTCACGGGCG ATATCCGGGA ACTCGGCCCG GGCGTGGCCG AGATGGAATT CGAGGAACGG
GAGTCCGATC CCGTCCTTAT CTTCATGGCG GACAAGACAG GGCCCGGGGC ATGGAATTTT
TACCTGTACA AGATCTTTGC CGATCCCTTC AACACCCCCG GGCTTGTCCT CGACCCGGCG
CTCTCCGGGG GATTTGTCTT CGAGGTGCAT GACACCGTGG CAAAACGGAT GATCACGTTC
TCCTGCCCCG AGGAAAGTTA CAGCCTGCTT GCCTATATCG GGTCATCATC GCGGTACGTG
ATCAAGTATG TGTTTAAACG GGATGGGACG ATTGTGGCTT CCACGAGCAC CCAGCGCCTC
AACCTTACCG CAGGAAAATA CGTGGGAAAA GATGATCCCG TTATGATCGT CCGGGCAGAG
AGCGGTTTTC CCTCTATGGG CGAGGTGCTT GAACCCTTCA CGGTCCCGGT GCTTGTGGCC
GGCTGGATGC GCGGCTCCCA CAATGGCCCG CTCCTGCCGG TCGGACTCTG CGATGCCAAC
TGCACCCGGT TTGACGGCCC TCCCCGGGTT GTCTGCTTCG GGTTCCAGGT GGCAAACGGG
GCCCTTGTCG GCCCGGCTGA CATATTCGAT GACCCCGCGT TTGACCGGGT AAGGGCACGG
TGCAACGAAC TCGCCGATAC GATCCGGGCG CAGGGGCCCT TTGAACCCCA CCGCCTTTCT
GCCGGGGAGA TGGAGTACAC CACGCTTCCC GCAGTTGAAA AGGAGCTGGA AAACCGCTGG
AAACTGCTCA AAGAATAA
 
Protein sequence
MPKTTISVIK ADVGSFPGHS RAHPKLLETA AQMLRAERGK LLLDSFVTHC GDDLELVMTH 
SHGANSEAVH RLAWNVFAEC TKVAKRFKLH GAGQDLLAEA FTGDIRELGP GVAEMEFEER
ESDPVLIFMA DKTGPGAWNF YLYKIFADPF NTPGLVLDPA LSGGFVFEVH DTVAKRMITF
SCPEESYSLL AYIGSSSRYV IKYVFKRDGT IVASTSTQRL NLTAGKYVGK DDPVMIVRAE
SGFPSMGEVL EPFTVPVLVA GWMRGSHNGP LLPVGLCDAN CTRFDGPPRV VCFGFQVANG
ALVGPADIFD DPAFDRVRAR CNELADTIRA QGPFEPHRLS AGEMEYTTLP AVEKELENRW
KLLKE