Gene Mboo_1589 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1589 
Symbol 
ID5410903 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1659151 
End bp1659714 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content56% 
IMG OID640868823 
Producthypothetical protein 
Protein accessionYP_001404749 
Protein GI154151131 
COG category[S] Function unknown 
COG ID[COG4983] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.159507 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGATC GGTATGAGAA TATCCCGGCA GATCTTACCC GGCTTGACCG CTGGGTCGTC 
TGGCGGTACG AAGAACGGAA CGGGAAGCTT ACCAAACCGC CGTATGTCCC GGCACCGGGA
AAAATGCGCC ATGCACTTGT CAATGTCCCC TCCACATGGG GGACTTTTGA GCAGGCAAAA
AACACCGTAA ACGCCGGTGG CTTTGACGGG ATCGGCTTTG TCCTGGGAGA GGGAATTTTC
GGCATCGATT TCGATCATGC GACTGATGCG ATGGTTCAGG AAGCATTATC CCTTGGTTCC
TATACGGAAT GGAGCCCTTC CGGTCACGGG GTGCATGTCA TTGGCCGTTC AGCGATAGTA
CTCAAAGGCA GGAAAAAAGG ATCTGTCGAA CTCTATATGC AGGGGAGGTA CTTTACGGTT
ACCGGGTCTG TGGTGCCCGG GTCGCCACCG GACATCCGGG TAATTTCGCC TGACCGGTTG
CTGGACTTTT TCCGGCGGCA TTTTGAGGAC GAGCCGGTAC CGGGCCGGAA CAATGGCACA
GGCTCGGATA CACCTGAGGC GTGA
 
Protein sequence
MRDRYENIPA DLTRLDRWVV WRYEERNGKL TKPPYVPAPG KMRHALVNVP STWGTFEQAK 
NTVNAGGFDG IGFVLGEGIF GIDFDHATDA MVQEALSLGS YTEWSPSGHG VHVIGRSAIV
LKGRKKGSVE LYMQGRYFTV TGSVVPGSPP DIRVISPDRL LDFFRRHFED EPVPGRNNGT
GSDTPEA