Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_1560 |
Symbol | |
ID | 5411247 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | + |
Start bp | 1628041 |
End bp | 1628871 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640868794 |
Product | prephenate dehydrogenase |
Protein accession | YP_001404720 |
Protein GI | 154151102 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0287] Prephenate dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCATGA AGGCAGGCAT CATCGGCGGC ACCGGCAAGA TGGGAAAACT GTTCCGCCCT GTTTTTGAGC GGGCGGACTA TGAGGTGATC GTATCCGGGC GGTCCACCGG GGTGACAAAC GCAGAGATCG CGGAAACCTG CGATCTCGTG ATTGTCTCGA TCCCCATCCG CGACACAATC CGGGTGATCG AAGAGATTGC CCCGCTCCTG AACGAAAGCC AGGTCCTCTG CGACTTCACC TCGCTCAAGG TGGCGCCGGT AGCGGCAATG CTCACATCCA GAGCGCAGGT GATCGGGCTC CACCCGATGT TTGGGCCCAC CGTCTCATCC ATTGCCCGCC AGACCATTGT GATGTGCCCG GCGCGGGTTA CCGGGACAAC GCTCTCCGAT CTCCGGCACA TTTTCCTGCG CGAAGGGGCA GTCTGCACGA TTGCAACCCC GGAGGAGCAT GACCGGATGA TGGCGATCGT CCAGGGGCTC ACCCACTTTG TCACGATCTG CATGGCCGAC TCTATCCGCC GCCTTGGCGT GGACATAGAA AAGACCGAAC CGTTCATGAG CCCGGTGTAC CAGATCGAGC TCTCGCTTGT GGGCCGGCTC CTCTCACAGG ACCCGGCGCT CTACGCAGAT ATCCTGCAGG AAAACCCGTT TGTGCCCGAA GTCCTTGCCG CGTGCAGGGC TGCGGCCGCC GACCTTGCAG GCATTGTTGC CTCCGGCGAT CCCGAAGCAT TCGCGGAGTT TTTCTCCCGG GACACGGAGC ACCTTGGCAC CTATTGCAAA CGCGGGCAGG TGCTCACCGA CACCCTGATC GAATGCATGG TGAAGAAATG A
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Protein sequence | MSMKAGIIGG TGKMGKLFRP VFERADYEVI VSGRSTGVTN AEIAETCDLV IVSIPIRDTI RVIEEIAPLL NESQVLCDFT SLKVAPVAAM LTSRAQVIGL HPMFGPTVSS IARQTIVMCP ARVTGTTLSD LRHIFLREGA VCTIATPEEH DRMMAIVQGL THFVTICMAD SIRRLGVDIE KTEPFMSPVY QIELSLVGRL LSQDPALYAD ILQENPFVPE VLAACRAAAA DLAGIVASGD PEAFAEFFSR DTEHLGTYCK RGQVLTDTLI ECMVKK
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