Gene Mboo_1538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1538 
Symbol 
ID5410654 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1609691 
End bp1610830 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content58% 
IMG OID640868772 
Productglycosyl transferase, group 1 
Protein accessionYP_001404698 
Protein GI154151080 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGTCAC TTAACGTAGC ATTTTTCTGC TGGGAATCGC TTTATGCCGA ACGCGTAGGG 
GGGCTCGCGA GTGCGGCAAC ACGGCTTGCA GAGAGCCTTG CAAAAGATCA CACCGTGCAT
TTCTTTACCC GGGGATGGAC AAAAGACCAG GAGATCAATG GCGTCTCGTA TCATTACTGC
AGGCCCCAGG GGAACAACAC CGTGCAGTAC TGCGAGGACA TGAGCAACCA GATGGTCGAC
CAGTTCCGGC AGTCCGACAG GAAAGAAAAG TTTGATATCC TGCACTTCCA TGACTGGCAT
CCCGTGCAGG CGCTCCACCG GCTTCAGGAC CGGGATACCA TCCTTACATT CCATTCCACG
GAGTACGGCA GGAACGGGAA CCAGTACGGC GACTGGTGGG AGTATAAGGA GATCTCCGGC
AAGGAATGGT ATGGCGGGCT TATCGCAAAG AAGGTGACCG CGGTCTCAAG TGTCATGAAA
CGGGAAGTGA TGCAGCTCTA TAATATCCCT GACTGGAAAT GCGACGTGGT GCCAAACGGT
ATCGTGCCGC AACAGTACCG GGCCAGTATC GATCCCGGGG ACGTGAAACG GGCATACGGG
ATCCATCCCT ATGCGCCCCT GATCCTTTTC ATCGGCCGTC TCGTATACCA GAAAGGCCCG
GACCTGTTTA TCGAGGCTCT GCGGAAGGTG TGCCACGACC GCTGGGATGC AAAGGTGATT
GTGGCCGGGG ACGGCGGGAT GCGGCAGTAT CTCCAGGACC GGGCACGGGA CCTTCCCGTC
AATTTTGTCG GGTATATCCC GGACTCTGAA TACATCCGGC TCCTGAATGC CTGCGACCTC
GTGGTCATCC CGAGCAGGAA CGAGCCGTTC GGCCTTGTGC TGCTCGAAGC ATGGAGCGCG
GAAAAACCGG TGGTGGCCTG TGATGTCGGC GGCCTTTCCG AGAACATCGA CACGTTTGTC
AACGGCATCA AGGTGCAGCC GGAACCGGAT TCGATTGCAT GGGGAATCGG TGCGATGATC
GACGATCCCA CGACAGCGCA GGTGCGGGGA CGGAGGGGAC GGGCAAAAGT GGACCGGCAG
TTCCTCTGGA GCCCGATCGC ACGCCGTATG GCAGACACCT ATTCGCGGGC ATGCGGGTGA
 
Protein sequence
MESLNVAFFC WESLYAERVG GLASAATRLA ESLAKDHTVH FFTRGWTKDQ EINGVSYHYC 
RPQGNNTVQY CEDMSNQMVD QFRQSDRKEK FDILHFHDWH PVQALHRLQD RDTILTFHST
EYGRNGNQYG DWWEYKEISG KEWYGGLIAK KVTAVSSVMK REVMQLYNIP DWKCDVVPNG
IVPQQYRASI DPGDVKRAYG IHPYAPLILF IGRLVYQKGP DLFIEALRKV CHDRWDAKVI
VAGDGGMRQY LQDRARDLPV NFVGYIPDSE YIRLLNACDL VVIPSRNEPF GLVLLEAWSA
EKPVVACDVG GLSENIDTFV NGIKVQPEPD SIAWGIGAMI DDPTTAQVRG RRGRAKVDRQ
FLWSPIARRM ADTYSRACG