Gene Mboo_1465 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1465 
Symbol 
ID5409847 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1505745 
End bp1507211 
Gene Length1467 bp 
Protein Length488 aa 
Translation table11 
GC content58% 
IMG OID640868700 
Productamino acid permease-associated region 
Protein accessionYP_001404626 
Protein GI154151008 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0531] Amino acid transporters 
TIGRFAM ID[TIGR00909] amino acid transporter 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCCAT CACTCAGGTC ACTCCGCAAC CATGCGATGT TTAAGACAAA ACCTATTGGA 
GAGCTGTTGG CGCACTGCTC CGGTGAGCAC GCCCTCCACC GGGTTATCAG CCCTTTTGAG
CTTGTCCTTC TTGGGATTGG GGCAGTGGTG GGGACGGGCA TTTTCGTAAT CACCGGTATT
GCTGCAGCAG AGTACTCCGG CCCGGCAATC ATCCTCTCGT TTGTCATATC GGGCATTGTC
TGCATGCTTG CCGCACTCTG TTATGCCGAG TTCTCCTCCA TGGTCCCGGT AGCAGGCAGT
GCGTACACGT ACTGTTACGC CACATTCGGG GAGATCTGGG CATGGATCAT CGGGTGGGAC
TTAATCCTCG AATACGCGGT ATCCCTTGCC GCAGTCGCAG TCGGATGGTC GGCATACGTG
ACAAGCCTGC TTTCAGAGAT CGGCATATTC CTTCCCCCGG CCCTGGCTAA CCCCCCGGGA
ATAGCCGGGG GCATCATCAA CCTTCCCGCG GTGCTCGTCA TTCTGGCAAT CACGGCCCTC
CTTATCGCAG GGGTAAAAGA GAGCATCCGG CTCAATACGA TCATCGTGAT TGTCAACATT
GCGGTGATCC TGATCTTCTT TTTCCTCTGT TACTCCCATA TCGATGCGGT CAACTGGCAC
CCGTTCATGC CGTTTGGCTG GACCGGGGTC TTTACCGGGG CGGCAATCGT TTTTTTTGCT
TACATCGGTT TTGATTCGGT TATGACCGCG GCCGAGGAGA TAGAGAATCC CCAGAAGAAC
CTGCCTATCG GGATTATCGG ATCAGTCGCC ATTGTCATCC TCCTCTATGT AGGAGTTGCC
GCCGTGCTTA CAGGCGTGAT CCCCTACGGG GAACTGGGCA CCAGTGCCCC GGTCGCAGAT
GCCCTGACCC GGATCGGGGT CCACGGGGGA GCTTTGCTCG TTTCGCTGGG CGCCCTCTGC
GGGATCACGT CCGTGATCCT TGTCACCCTC TACGGCCAGA CCCGGATCTT CTTTGCGATG
GCGCGGGACG GCCTGCTCCC GGCGTTTTTC TCCGATATCC ACAGGACATT CCATACGCCG
GCGAAAGTGA CACTTCTCGT GGGCCTCTCG ACCGCCCTTG TTGCCGGCCT GCTGCCGCTA
GGCCTGATCG CGGGACTGGT AAACATCGGC ACACTCGCGG CGTTCATGGT CGTTGCTTTC
GGGATCATTC TTTTGCGGAG GAGCCAGCCG CACCTCGAAC GGCCGTTCAG GTGCCCGGCC
ATGCCGTATG TCCCCCTCCT CTGCATTGTC TCCTGCGCAG TACTGATCCT TGTCCTTCCT
GCGGTGACGC AGGCCCGGTT TGTGATCTGG ATGCTTATCG GACTTGCGAT TTACTTTTTC
TTCGGGATAA AAAACAGTGC GAACGGGAAA AGCCCGGCTG CCGATCCCGG GATCTGCGGG
GCAGGGGCGG ACTCCCCCGA CCGGTAA
 
Protein sequence
MAPSLRSLRN HAMFKTKPIG ELLAHCSGEH ALHRVISPFE LVLLGIGAVV GTGIFVITGI 
AAAEYSGPAI ILSFVISGIV CMLAALCYAE FSSMVPVAGS AYTYCYATFG EIWAWIIGWD
LILEYAVSLA AVAVGWSAYV TSLLSEIGIF LPPALANPPG IAGGIINLPA VLVILAITAL
LIAGVKESIR LNTIIVIVNI AVILIFFFLC YSHIDAVNWH PFMPFGWTGV FTGAAIVFFA
YIGFDSVMTA AEEIENPQKN LPIGIIGSVA IVILLYVGVA AVLTGVIPYG ELGTSAPVAD
ALTRIGVHGG ALLVSLGALC GITSVILVTL YGQTRIFFAM ARDGLLPAFF SDIHRTFHTP
AKVTLLVGLS TALVAGLLPL GLIAGLVNIG TLAAFMVVAF GIILLRRSQP HLERPFRCPA
MPYVPLLCIV SCAVLILVLP AVTQARFVIW MLIGLAIYFF FGIKNSANGK SPAADPGICG
AGADSPDR