| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1448 |
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| Symbol | |
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| ID | 5411571 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | + |
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| Start bp | 1485117 |
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| End bp | 1485584 |
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| Gene Length | 468 bp |
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| Protein Length | 155 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640868683 |
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| Product | hypothetical protein |
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| Protein accession | YP_001404609 |
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| Protein GI | 154150991 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
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| TIGRFAM ID | [TIGR00369] uncharacterized domain 1
[TIGR02286] phenylacetic acid degradation protein PaaD |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.043674 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0181319 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCTACAC CCAGAAAAAA TACAACAAAT GAGGGCGGGA TAAGAATAAC AGGGCAGCCG
GAATGTGAGG ACACTCCCGC CCCTGTCGCT GTTGAGGACC GGATAGCCGA ATTCGAGGAG
AGTGGGTTTG GCCGGCTATT GGGGCTGCAT ATCACCGAGG CGCGTGATGG CTATGCCCGG
GTTGAGATGG ACTGCGAGGG GAAGTGCAAT CCGCACGGGA TAGCCCACGG CGGGGCGATT
TTTGCTCTTG CCGATCATGC ATTTGGGATC GCGTCCAACT GCGGGAATTT CCACCACACG
GCAGTCTCTG TCCACATCCA GTACCTTGCC CCGGCAAAAG GCCGGCTCGT GGCAATTGCC
GAACGTGTGG GAAGAACCGG TACCTGCGAG ATGCACCGGG TCACCGTGTA CGAGGGTGAC
CGGATCGTAG CCATCTTTGA CGGCGTCGCA TTCCGGGTCT CATCGTAG
|
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| Protein sequence | MPTPRKNTTN EGGIRITGQP ECEDTPAPVA VEDRIAEFEE SGFGRLLGLH ITEARDGYAR
VEMDCEGKCN PHGIAHGGAI FALADHAFGI ASNCGNFHHT AVSVHIQYLA PAKGRLVAIA
ERVGRTGTCE MHRVTVYEGD RIVAIFDGVA FRVSS
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