| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1434 |
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| Symbol | |
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| ID | 5410751 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | + |
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| Start bp | 1469874 |
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| End bp | 1471142 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640868669 |
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| Product | natural resistance-associated macrophage protein |
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| Protein accession | YP_001404595 |
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| Protein GI | 154150977 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1914] Mn2+ and Fe2+ transporters of the NRAMP family |
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| TIGRFAM ID | [TIGR01197] NRAMP (natural resistance-associated macrophage protein) metal ion transporters |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000145386 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.000182924 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGATTTTT TGTCTAAGTT CTATTTTAAC TACCGGAGAA TCATCAAAAC CATCCAGATC
TACCTGCTGC TGGCCGGTCC CGGTCTTATC GTCATGATTG CGGACAATGA TGCCGGGGGT
ATCACCACCT ATGCGGCAAC CGGGGCAAAA TTCGGGTACA ACCTGATCTG GTTTTTGATC
CTGCTTGGAC CTGTTGCCTA CTTTGTCCAG GAGATGACCG TACGGCTCGG GGCCGTAACC
AAGCATGGGC ATGCAGAGGC GATATTTTCC GCGTTTGGTT CGTTCTGGGG CTGGTTCTCC
CTGTGCGATC TGACCCTGGT GAACTGGCTT ACACTCGTGA CCGAGTTTAT CGGGATGACC
GCAGGCCTTG CAATATTCGG TATGCCCCCA GTACTAACGG TCCTTATCGT AATCTGCATC
ATGATGGCGA TTGTCGTTTC GGGCCGGTAC TGGACCTGGG AGAAGCTCAC GATGGTGCTC
TGCCTTGTGA ACCTGATCTA TATTCCCGCG GCATTCCTTG TTCACCCTTC CCTTGACCAG
GTGATCCATA ACGGATTTAT CCCCAACTTC CCGGGCGGCT TTAACGGGGA ACTGTTCTTT
TTCCTGATGG CAAACATCGG TACCACAATC GCTCCATGGA TGATCTTCTT CCAGCAGAGC
GCGGTCGTGG ACAAGAACAT GAAGGAGAAG GATATCCCCT GGGGCAAGTT TGACACAGTG
GTCGGGGCCA TCTTCACGGT TCTTGTTGCA GTCTTTATCA TTATTGTGAC CGGGACTTTG
CTCAAGGGGA TGGACGTGGA GAGCGCTGCA CAGGCCGCAG GAATCCTGAT GGGCGTACAC
CCATGGGTGG GAACGCTGCT TGCCATTGGC CTCTTCGATG CAGGATTCCT CGGTGCACTC
TGTATTGCAC TCACGAGCTC GTGGGCATTC GGCGAGGTTT TCGGGTGGGC ACACTCCTTA
AACTACAAGG TAAAAGAGGC AATCTGGTTC TACCTCTTCT ACTTCTTTGG ACTTGCAACA
GCAGGATGTG TCGTCCTGAT CCCCGGCGCC CCTCTCGTGC TTATCACACT TTTTGTCCAG
GTCGTTGCAG TGACCCTGCT CCCGGCAGCG CTTGTGTTTT TGATCATCCT TCTCAACAAC
GAGGAAATCA TGGGGAAATA CAAAAATACC CTCTTTGACA ATATCGCAAA TATTACCATC
GTGACGGTCA TCATTGTCAT ATCCTCGTTA TATGGGATCA GCACGTTATT CCCGAACATG
TTCGGGTAG
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| Protein sequence | MDFLSKFYFN YRRIIKTIQI YLLLAGPGLI VMIADNDAGG ITTYAATGAK FGYNLIWFLI
LLGPVAYFVQ EMTVRLGAVT KHGHAEAIFS AFGSFWGWFS LCDLTLVNWL TLVTEFIGMT
AGLAIFGMPP VLTVLIVICI MMAIVVSGRY WTWEKLTMVL CLVNLIYIPA AFLVHPSLDQ
VIHNGFIPNF PGGFNGELFF FLMANIGTTI APWMIFFQQS AVVDKNMKEK DIPWGKFDTV
VGAIFTVLVA VFIIIVTGTL LKGMDVESAA QAAGILMGVH PWVGTLLAIG LFDAGFLGAL
CIALTSSWAF GEVFGWAHSL NYKVKEAIWF YLFYFFGLAT AGCVVLIPGA PLVLITLFVQ
VVAVTLLPAA LVFLIILLNN EEIMGKYKNT LFDNIANITI VTVIIVISSL YGISTLFPNM
FG
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