Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_1424 |
Symbol | |
ID | 5412026 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | - |
Start bp | 1457991 |
End bp | 1460513 |
Gene Length | 2523 bp |
Protein Length | 840 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640868659 |
Product | hypothetical protein |
Protein accession | YP_001404585 |
Protein GI | 154150967 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.313728 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.000424161 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGATTAT CAATGACAGG CGATGTTATC GTCACAATTT TTCTGGTATC GATATTTCTG ATATCAGGTG TACAAGGTGA TTCGAATATC ACCTCACCCT CAATTATGCC CGTTTCGATG AGCATGGGAG CGGTTGCATC CAATGGAACA TCGACAGAAC AAAACGCGGC TTCACCGCGA AGCTTCGCAA GTTCGGATAC AAGTTCCCTT CAAATCATGG CTTCCAGCAT TCCTGGCATC GAATGGCAGG ATCTCCTTGG TGGCCTTGAC GGAGAAACAC TTTCTGGTAT CCGGCAGACA CCCGATGGCG GATATATCGC TTGTGGATTT GTGGGATCTC TTGCCGGCGA TGGTGATGTC ACTTCAACCC ATGGCGGGGG GGATGTCTGG ATCATCAAAT TTGATTCCGC AGGGAACATC CAGTGGCAAC GATCGTTAGG TGGGAGCGGT TACGATCAAG CGATAAGCAT TCAATTAACC TCTGATGGAG GATATGTCTT TGCAGGCTTT ACGAAATCCA GTAATAACGG AGATGTCGGC CAAAATAATG GGGGTTACGA TGCGTGGATC GTGAAACTGG ATTCAAACGG GAACATCCAG TGGCAGAAAG TACTTGGAGG AAGTGCCGAT GATCTGGCAT TTAGCATCCG GCAGACATCA GACGGGGGGT ATATTTTTTC CGGAGTAACC GGCGCTACAT TCAACGATGA ACTTAACATA GCCTCCCATC CGTTTATGGG AGGACATGCG TGGGTAGTAA AACTGGATTC CACAGGTAGC GTCACTTGGC AAAAAGTATA CGGAGGGAAT AGTGATGATG AGGCAAACAG TATCGTACAA ACATCCGATG GAGGATACAT CTTTGTCGGC ACTACATATT CCAATAACAG CGGGGATGTT GGAGCAAATC ACGGATTAAC AGATATCTGG GTTGTCAAAC TGGATTCCAC AGGTACGATT CAATGGACAA AGCTTCTTGG AGGTGCGGGA TGGGACATTA CGAGTCTGTG GTGGGATAAC GGAATTCAGC AAACTTCCGA TGGCGGGTAT GTCATTATTG GTACAACTAC TTCAACGGAT TTCGGCGGGC AAATAGGGAT AAATCATGGC GCAGGTGATG TCTGCATAAT CAAACTGGAT AACAACGGAA ATATTATCTG GGAACGTCCC TATGGGGGAT CCAACGCAGA TAATGGAATA AGCATTAACC AGACTCCCGA TGGGGGTTAT GTCTTTACCG GATTTACTTA TTCGGATAAC TCCGGAGATG TAGGCGCAAG TTATGGAAAC GGGGATTACT GGGTAGGGAA AACAGATTCT AACGGGAATC TCCAATGGCA GATTCCACTT GGAGGATCTG CCTACGATCA GGCAGAATCT ATTCAGTCAA CATCTGATGG AGGATACATT GTCACCGGAC GATCCTATTC GAGTAATAGT GGGGTAGTGG CCGAACAAAA TCATGGAAAT ATAGACGCGT GGGTAGTGAA ACTCACCCCC CGTTTTGTCG TTAACGTGAT GGATTCCGAT ACCGGCGGAT TTATTCCAGG ATCCAATGTT GGATTGTACG ATTCCAAATA CGATGTCTGG ATGAATCAAA CAGTTGGGGA TGGACCGGTT GTATTTAACG GATCCGTGGG ATTGAATGCA TTCAATTTTA CGGATGACAG GGTTTTCGGC TTGAGTGTAT CTGCTGGCGG GTATCCTTCC GCATCCGAAA ACGTGAAGTT TGAGATTACC AACCAGACCG TCAACGTATA TTTAACCTCA TTTGACAGAC CAGCGATTGG ACAAACATAC TCGATGACTA TGATTCAAAA TCCTGGCCCA TTGGGGGGGG TCTCTAGCCT AATTGTGGAT GGTTTTGGAT GGGGGACAGC AGTTCATGGT GTCGTACAAA ATTGGCTGGA AACTCAAGAG GGATGGTCAA ATACATTTTA TCACACGGAA GATCAAGTTA CACAGGTCGA TTTTGGAACT AACTATCAAG GATTAGATAA TGCTACTTTC TTTTACCATT TTGGACATGG ACATTTACTT TTTTTGATGG AAGGATCCGA ATTAATCACT ACAGATACAT ACATCCCGCT GTCTGGATGG TCCGCCTTTT ATCCGACACC GAGTACTAGC GTGAAACCTT CTGATGTCTA TAAAAAATGG GGCGGTCAGA ACAAATGGGT TTTCTTGGAT GCCTGTAGTT TACTTACCGA TAAACGATGG GGGGGGGCAT TAAATACATC ACACGGAATT CTCGGATATC AATCTTCAAA GTACGTTAGT ACAGATCTTC CAAATGCATT CTTTTACAAT GCATTCGTCA GAAACGAATC TATCGTTCAA TCGTACTATG AAGCCACAAT CGCTTCACAA GCTGGATATG CTCCTGCAGT CATTTTCGCC ACACCTGATC AATTTTATCA TGACCATATG CCGGGCCATG GAACAATTGC CGCCGATGAA AGTCCCGATA ATAATATTAC ATATTATGTT AGTTGGTGCG CACAAGGAGT GTGTGGCCAA TGA
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Protein sequence | MRLSMTGDVI VTIFLVSIFL ISGVQGDSNI TSPSIMPVSM SMGAVASNGT STEQNAASPR SFASSDTSSL QIMASSIPGI EWQDLLGGLD GETLSGIRQT PDGGYIACGF VGSLAGDGDV TSTHGGGDVW IIKFDSAGNI QWQRSLGGSG YDQAISIQLT SDGGYVFAGF TKSSNNGDVG QNNGGYDAWI VKLDSNGNIQ WQKVLGGSAD DLAFSIRQTS DGGYIFSGVT GATFNDELNI ASHPFMGGHA WVVKLDSTGS VTWQKVYGGN SDDEANSIVQ TSDGGYIFVG TTYSNNSGDV GANHGLTDIW VVKLDSTGTI QWTKLLGGAG WDITSLWWDN GIQQTSDGGY VIIGTTTSTD FGGQIGINHG AGDVCIIKLD NNGNIIWERP YGGSNADNGI SINQTPDGGY VFTGFTYSDN SGDVGASYGN GDYWVGKTDS NGNLQWQIPL GGSAYDQAES IQSTSDGGYI VTGRSYSSNS GVVAEQNHGN IDAWVVKLTP RFVVNVMDSD TGGFIPGSNV GLYDSKYDVW MNQTVGDGPV VFNGSVGLNA FNFTDDRVFG LSVSAGGYPS ASENVKFEIT NQTVNVYLTS FDRPAIGQTY SMTMIQNPGP LGGVSSLIVD GFGWGTAVHG VVQNWLETQE GWSNTFYHTE DQVTQVDFGT NYQGLDNATF FYHFGHGHLL FLMEGSELIT TDTYIPLSGW SAFYPTPSTS VKPSDVYKKW GGQNKWVFLD ACSLLTDKRW GGALNTSHGI LGYQSSKYVS TDLPNAFFYN AFVRNESIVQ SYYEATIASQ AGYAPAVIFA TPDQFYHDHM PGHGTIAADE SPDNNITYYV SWCAQGVCGQ
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