Gene Mboo_1424 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1424 
Symbol 
ID5412026 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1457991 
End bp1460513 
Gene Length2523 bp 
Protein Length840 aa 
Translation table11 
GC content46% 
IMG OID640868659 
Producthypothetical protein 
Protein accessionYP_001404585 
Protein GI154150967 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.313728 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.000424161 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGATTAT CAATGACAGG CGATGTTATC GTCACAATTT TTCTGGTATC GATATTTCTG 
ATATCAGGTG TACAAGGTGA TTCGAATATC ACCTCACCCT CAATTATGCC CGTTTCGATG
AGCATGGGAG CGGTTGCATC CAATGGAACA TCGACAGAAC AAAACGCGGC TTCACCGCGA
AGCTTCGCAA GTTCGGATAC AAGTTCCCTT CAAATCATGG CTTCCAGCAT TCCTGGCATC
GAATGGCAGG ATCTCCTTGG TGGCCTTGAC GGAGAAACAC TTTCTGGTAT CCGGCAGACA
CCCGATGGCG GATATATCGC TTGTGGATTT GTGGGATCTC TTGCCGGCGA TGGTGATGTC
ACTTCAACCC ATGGCGGGGG GGATGTCTGG ATCATCAAAT TTGATTCCGC AGGGAACATC
CAGTGGCAAC GATCGTTAGG TGGGAGCGGT TACGATCAAG CGATAAGCAT TCAATTAACC
TCTGATGGAG GATATGTCTT TGCAGGCTTT ACGAAATCCA GTAATAACGG AGATGTCGGC
CAAAATAATG GGGGTTACGA TGCGTGGATC GTGAAACTGG ATTCAAACGG GAACATCCAG
TGGCAGAAAG TACTTGGAGG AAGTGCCGAT GATCTGGCAT TTAGCATCCG GCAGACATCA
GACGGGGGGT ATATTTTTTC CGGAGTAACC GGCGCTACAT TCAACGATGA ACTTAACATA
GCCTCCCATC CGTTTATGGG AGGACATGCG TGGGTAGTAA AACTGGATTC CACAGGTAGC
GTCACTTGGC AAAAAGTATA CGGAGGGAAT AGTGATGATG AGGCAAACAG TATCGTACAA
ACATCCGATG GAGGATACAT CTTTGTCGGC ACTACATATT CCAATAACAG CGGGGATGTT
GGAGCAAATC ACGGATTAAC AGATATCTGG GTTGTCAAAC TGGATTCCAC AGGTACGATT
CAATGGACAA AGCTTCTTGG AGGTGCGGGA TGGGACATTA CGAGTCTGTG GTGGGATAAC
GGAATTCAGC AAACTTCCGA TGGCGGGTAT GTCATTATTG GTACAACTAC TTCAACGGAT
TTCGGCGGGC AAATAGGGAT AAATCATGGC GCAGGTGATG TCTGCATAAT CAAACTGGAT
AACAACGGAA ATATTATCTG GGAACGTCCC TATGGGGGAT CCAACGCAGA TAATGGAATA
AGCATTAACC AGACTCCCGA TGGGGGTTAT GTCTTTACCG GATTTACTTA TTCGGATAAC
TCCGGAGATG TAGGCGCAAG TTATGGAAAC GGGGATTACT GGGTAGGGAA AACAGATTCT
AACGGGAATC TCCAATGGCA GATTCCACTT GGAGGATCTG CCTACGATCA GGCAGAATCT
ATTCAGTCAA CATCTGATGG AGGATACATT GTCACCGGAC GATCCTATTC GAGTAATAGT
GGGGTAGTGG CCGAACAAAA TCATGGAAAT ATAGACGCGT GGGTAGTGAA ACTCACCCCC
CGTTTTGTCG TTAACGTGAT GGATTCCGAT ACCGGCGGAT TTATTCCAGG ATCCAATGTT
GGATTGTACG ATTCCAAATA CGATGTCTGG ATGAATCAAA CAGTTGGGGA TGGACCGGTT
GTATTTAACG GATCCGTGGG ATTGAATGCA TTCAATTTTA CGGATGACAG GGTTTTCGGC
TTGAGTGTAT CTGCTGGCGG GTATCCTTCC GCATCCGAAA ACGTGAAGTT TGAGATTACC
AACCAGACCG TCAACGTATA TTTAACCTCA TTTGACAGAC CAGCGATTGG ACAAACATAC
TCGATGACTA TGATTCAAAA TCCTGGCCCA TTGGGGGGGG TCTCTAGCCT AATTGTGGAT
GGTTTTGGAT GGGGGACAGC AGTTCATGGT GTCGTACAAA ATTGGCTGGA AACTCAAGAG
GGATGGTCAA ATACATTTTA TCACACGGAA GATCAAGTTA CACAGGTCGA TTTTGGAACT
AACTATCAAG GATTAGATAA TGCTACTTTC TTTTACCATT TTGGACATGG ACATTTACTT
TTTTTGATGG AAGGATCCGA ATTAATCACT ACAGATACAT ACATCCCGCT GTCTGGATGG
TCCGCCTTTT ATCCGACACC GAGTACTAGC GTGAAACCTT CTGATGTCTA TAAAAAATGG
GGCGGTCAGA ACAAATGGGT TTTCTTGGAT GCCTGTAGTT TACTTACCGA TAAACGATGG
GGGGGGGCAT TAAATACATC ACACGGAATT CTCGGATATC AATCTTCAAA GTACGTTAGT
ACAGATCTTC CAAATGCATT CTTTTACAAT GCATTCGTCA GAAACGAATC TATCGTTCAA
TCGTACTATG AAGCCACAAT CGCTTCACAA GCTGGATATG CTCCTGCAGT CATTTTCGCC
ACACCTGATC AATTTTATCA TGACCATATG CCGGGCCATG GAACAATTGC CGCCGATGAA
AGTCCCGATA ATAATATTAC ATATTATGTT AGTTGGTGCG CACAAGGAGT GTGTGGCCAA
TGA
 
Protein sequence
MRLSMTGDVI VTIFLVSIFL ISGVQGDSNI TSPSIMPVSM SMGAVASNGT STEQNAASPR 
SFASSDTSSL QIMASSIPGI EWQDLLGGLD GETLSGIRQT PDGGYIACGF VGSLAGDGDV
TSTHGGGDVW IIKFDSAGNI QWQRSLGGSG YDQAISIQLT SDGGYVFAGF TKSSNNGDVG
QNNGGYDAWI VKLDSNGNIQ WQKVLGGSAD DLAFSIRQTS DGGYIFSGVT GATFNDELNI
ASHPFMGGHA WVVKLDSTGS VTWQKVYGGN SDDEANSIVQ TSDGGYIFVG TTYSNNSGDV
GANHGLTDIW VVKLDSTGTI QWTKLLGGAG WDITSLWWDN GIQQTSDGGY VIIGTTTSTD
FGGQIGINHG AGDVCIIKLD NNGNIIWERP YGGSNADNGI SINQTPDGGY VFTGFTYSDN
SGDVGASYGN GDYWVGKTDS NGNLQWQIPL GGSAYDQAES IQSTSDGGYI VTGRSYSSNS
GVVAEQNHGN IDAWVVKLTP RFVVNVMDSD TGGFIPGSNV GLYDSKYDVW MNQTVGDGPV
VFNGSVGLNA FNFTDDRVFG LSVSAGGYPS ASENVKFEIT NQTVNVYLTS FDRPAIGQTY
SMTMIQNPGP LGGVSSLIVD GFGWGTAVHG VVQNWLETQE GWSNTFYHTE DQVTQVDFGT
NYQGLDNATF FYHFGHGHLL FLMEGSELIT TDTYIPLSGW SAFYPTPSTS VKPSDVYKKW
GGQNKWVFLD ACSLLTDKRW GGALNTSHGI LGYQSSKYVS TDLPNAFFYN AFVRNESIVQ
SYYEATIASQ AGYAPAVIFA TPDQFYHDHM PGHGTIAADE SPDNNITYYV SWCAQGVCGQ