Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_1388 |
Symbol | |
ID | 5412038 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | - |
Start bp | 1421193 |
End bp | 1422374 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640868621 |
Product | acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase |
Protein accession | YP_001404549 |
Protein GI | 154150931 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
TIGRFAM ID | [TIGR01910] acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0811726 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.459687 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGGAGC CTGATATTAT CTGTTCGGAC CTTGTCTCTA TGCGGAGTGA AAACCCGCCG GGCGATACCT CCGGACCCAT AGGATACATC AGGGACTTTC TCACCGACCG GGGCATAAAA TCGGATATTA TTTGTTCTCC TGGGGGACGT TGCAACCTGG TGACCCGGGG AGATCCCCGT TCGCTCATGC TCTGCGGGCA TGTGGATGTA GTACCGGCCC TTGAAGAGGG TTGGGAGCGC CCCCCGTTTT CCGGGGCCAT CGAAGAGGGA TATGTCTGGG GCCGGGGTAC AAGCGATATG AAAGGCGGTG TCGCTGCCAT CCTCTCTGCC TGCGATACCC TTCTTGAAGC CGGTGAGCCC CTGCCAGCCA CCCTCCTTTT TGTGTGTGAC GAAGAGACCG GAGGCGAGTA CGGAGTAAGG CTCCTGCTTG AAAAAGGTCT TCTTCCTCCC TGTGATTGCC TGATTGCCGA ACCCTCTCCT GCCCTGCATC CCTGCATCGG GCAGAAGGGG CTCTGCCGGC TTGAACTCCG GTTTACCGGG AAACCCGGCC ATGGGTCCCT GTATCCCCTC GTGGGGAGGA GTGCAGTTAT GGAAGCCGTA CACCTGCTTG AATATGTCAG GGGTCTTCCC GATCATGTTT TTTCCCTGGA TGAAGATCTC AGGGACCTGA TCAGGTCTTC GTCAGCAGTC TTTGCCGAAG AGTTCGGGTT AGATAAGGGA GGGGATATCC TGGAGCGGGT GTCGTTTAAC CCCGGCATAA TAGCCGGAGG GGAGAAGGTC AACATTGTGG CCCAGCATTG CAATCTCGAT CTTGAACTGC GTATCCCGTG GGGATGCGAT ATACGGATGC TGGTTGAAGG GATTATGGCT CACGCACCCC ATGCCGCGCT TGTCAGGAAA GCCCTTCATG AGCCTTCCCT GACCGATCCT CTCTGTGATT TTGTTTCCGT GGTCTGTCGG GAGGTCAGTG CCGTGCAGGG CAGACCTGCG AGCCCAATCC TCCAGTGGGC GGCAAGCGAT GCCCGGCACC TGCGTGCAGC GGGATTCCGG GTGATCGAGT ATGGTCCCGG CGATCTAGCC ACGCTGCATG GGATCAATGA ACGGGTTTCT GTTGCAGCAC TCAAAAAAGC CGCAGAAATT TATCTGCGGG TTATGCGGGA GTATAGTTCA CACCTGTCCT AA
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Protein sequence | MMEPDIICSD LVSMRSENPP GDTSGPIGYI RDFLTDRGIK SDIICSPGGR CNLVTRGDPR SLMLCGHVDV VPALEEGWER PPFSGAIEEG YVWGRGTSDM KGGVAAILSA CDTLLEAGEP LPATLLFVCD EETGGEYGVR LLLEKGLLPP CDCLIAEPSP ALHPCIGQKG LCRLELRFTG KPGHGSLYPL VGRSAVMEAV HLLEYVRGLP DHVFSLDEDL RDLIRSSSAV FAEEFGLDKG GDILERVSFN PGIIAGGEKV NIVAQHCNLD LELRIPWGCD IRMLVEGIMA HAPHAALVRK ALHEPSLTDP LCDFVSVVCR EVSAVQGRPA SPILQWAASD ARHLRAAGFR VIEYGPGDLA TLHGINERVS VAALKKAAEI YLRVMREYSS HLS
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