| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1337 |
|---|
| Symbol | |
|---|
| ID | 5411604 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | - |
|---|
| Start bp | 1363585 |
|---|
| End bp | 1364637 |
|---|
| Gene Length | 1053 bp |
|---|
| Protein Length | 350 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640868569 |
|---|
| Product | response regulator receiver modulated CheB methylesterase |
|---|
| Protein accession | YP_001404498 |
|---|
| Protein GI | 154150880 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2201] Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.241681 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.456966 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTAAAGG TTCTCATTGT TGATGACTCC GTTTTTATGC GGACGGTCAT CCGGGACATG
CTGCAGAAGG ATCCTTCGAT CGAGATCGTG GGGACCGCCT CCAATGGCCT TGAGGCACTG
GAGAAGATAA AGTCCCTCCG GCCCGATCTG ATAACTCTGG ATATCGAGAT GCCCCGCATG
AATGGTCTTG AGGTGCTGCG CGAGCTCAAG AAAGCGGCAT GGCACCCCCG GACGCTCATG
CTCTCATCGC TTACTTCGGA AGGTGCCGAG ATGACCGCCG AGGCGATACG ACTGGGGGCT
GACGATTTCA TGCTCAAGCC AAAGGATGTC CCCCAGCTCC GGTTGATAGC AGATGAGCTG
GTAGCCACAA TCCACCACCT TACCTCATCG CCCCCCGCCT CAAAAAAAGA GGCATTGACC
GTTTCGCACC GGGAGGGGAG TGCTGAGCGC GTGGTCCTGA TTGGCTCTTC GGCCGGCGGT
CCTCCCATGC TTGACGCTAT TCTGGCTAAA CTGCCCGCCG ACTTCCCTGC TTGTGTGGTA
CTCACCCAGC ATATGCCGGT GGGTTTTACT GCCCCTCTTG CCGCCCGCTT CAACCGCCTG
GCCCACATGC CGGTCAAGGA GACAGAGAAC GGGGATATGC TCCGGGAAGG TTCGGTCTTT
CTCTCAAAAG CCGGTGTCCA CACCATGATA GGAGCTGCGC TGACCGCAGA CGGGAAACGG
ACAGGCCGGG TTATCCATTC CAGCGCTCCC CCGATCCATG GGGTGCGGCC TGCCGTGGAT
AAGACGTTTG AGTCCGCGGC ACAGGTCTTT GGGAAGAATG CCGTGGCTGT CATCTTAAGC
GGGATGGGAA ATGATGCCGG TGCCGGGGCG GCAGCCATCA AGGAAGCCGG AGGGACAATT
ATCCTGTGCG ACCAGAAGGA TTGTCTTGTG TACGGAATGG CGAGATCGGC GATCCAGCAT
AACGCGGTAG ACCAGGTCCT TCCCTTATCA AAGATCCCGG AGGCCATCGA ACGTATTGTC
GGGAAGATGG CCGCGGAGGG CAGCCATGTC TGA
|
|---|
| Protein sequence | MVKVLIVDDS VFMRTVIRDM LQKDPSIEIV GTASNGLEAL EKIKSLRPDL ITLDIEMPRM
NGLEVLRELK KAAWHPRTLM LSSLTSEGAE MTAEAIRLGA DDFMLKPKDV PQLRLIADEL
VATIHHLTSS PPASKKEALT VSHREGSAER VVLIGSSAGG PPMLDAILAK LPADFPACVV
LTQHMPVGFT APLAARFNRL AHMPVKETEN GDMLREGSVF LSKAGVHTMI GAALTADGKR
TGRVIHSSAP PIHGVRPAVD KTFESAAQVF GKNAVAVILS GMGNDAGAGA AAIKEAGGTI
ILCDQKDCLV YGMARSAIQH NAVDQVLPLS KIPEAIERIV GKMAAEGSHV
|
|---|
| |