Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_1299 |
Symbol | |
ID | 5410623 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | - |
Start bp | 1320662 |
End bp | 1321375 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640868529 |
Product | xylose isomerase domain-containing protein |
Protein accession | YP_001404460 |
Protein GI | 154150842 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.47167 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.0132415 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTGGCA TCTCCACGCT CTGCCTCCTT GATGAACCGC TCCCCGTAGC GCTGGATCGT ATTGCAGGGG TTACCGGTGT AATCGAGGTG ATGGACGAGG GACGCCATTT CCTTACAAAT GCCGAACCTC TTCTTTCCCA TACCTGTACC TTTTCTCTTC ATTCGCCCAG CCGGGGGACA AACCTTGCAA GCCTTCTCGA ACCGATCCGG CGGGCGAGCG CGGAAGTGAT TACAGAATGT TTTGCCATTG CTGCCGAGGT CGATGCGCAT GTCGTGGTCC ATCCCGGCTA CATTGCCTGG CCCGGAGAAC AGGAACCTTC ACAGGTGCAG TTATCCCGGT CGCTCGCGGA GCTTTCGGCA GCCGCCCGTG ACTATGGGAT TACGTACTCG GTAGAGAACA TGGGTGACTG GGAGCATTTC CTGTTCAAGA CCCCGGCCGA GCGTTCCCTG ATTGGCGACT GCGGTTTTAC CCTTGACGTG GGGCATGCGC ACCAGAACCA CTGCCTTGCC GGATTTCTCA AACACCCCGC GCAGCATTAC CACCTGCACG ACAATGACTC CACGGCAGAT TCCCATCTTG CCGTGGGGAG GGGAACCATA GATTTCGGGC CGGTGATGGC GGCGGTAAAA GAGAGCCGGG GATCGCCGGT GATTGAGGTG GCAGACTTTG ACGGGGCGGT GGCAAGCTAC CGGTTGTTGA AGGGAATGCT GTAA
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Protein sequence | MLGISTLCLL DEPLPVALDR IAGVTGVIEV MDEGRHFLTN AEPLLSHTCT FSLHSPSRGT NLASLLEPIR RASAEVITEC FAIAAEVDAH VVVHPGYIAW PGEQEPSQVQ LSRSLAELSA AARDYGITYS VENMGDWEHF LFKTPAERSL IGDCGFTLDV GHAHQNHCLA GFLKHPAQHY HLHDNDSTAD SHLAVGRGTI DFGPVMAAVK ESRGSPVIEV ADFDGAVASY RLLKGML
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